Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0457 ATGTTGACCACCGCCGCTGCTCACGTCCTCCTCTACCCTTTTTATAGTTCAGGCCATATCATCCCCATCCTCGACCTCGCCACTAAATTACTCAGCCGCGGCCTAGAAGTCACCGTTTTGGTTACACCCTCAAATCTCCCCTTACTCGATTCCCTCCTCTCCAAGTACCCTTCTTCTTTTCAAAGCCTGGTTCTTCCCCTACCGGAATCAGGTCCTGTGTCAGCCAAAAATCTCCTGTTTAACTTGCGGGCCATGACTGGATTATCTGATGACATCATCCAGTGGTTCCACTCCCACCCTAATCCGCCTGTGGCCATCGTATCTGATTTTTTCTTGGGTTGGACACACAAAATTGCCTGTCAGCTGGGCGTGTCACATATTGTCTTCTCCCCATCCGGCGTCTTGGGTCTCTCTGTTGGTTATGCCGTCTGGCGCGACCGACCCAAGAATGATGAACCCGAGAATCACGATTTCATGGTTTCCTTTCCTAGCATTCCCAATTCCCCAAGTTACCCATGGTGGCAGATCTCTGTGCTGTATCGCAATCTTGAGGATGGAGACCCAGATAAGGAATTTTTCAGGAATTGCATGTTGGGCAACATAGCGAGTTGGGGTCTCGTCGTCAACACGTTCACTGAGTTGGAACGAGTTTACATCGAGGCTATGAAGAAACTCATGGGTCACAACCGGGTCTGGGCAGTGGGTCCCTTACTGCCGGCACCTGAGGATGATGATGCAAAACGGGGTGGGTCCAGCGCGGTGCCATCTCATAAGGTGCTATCGTGGCTTGATCAGTGCGAAAATGATTCTGTTGTTTATATATGCTTTGGGAGTCGTACTAGTCTTCCAAATCAGCAAATGGTTGTGTTGGCTGCTGCATTGGAGGCAAGCGGAGTCAATTTTATCTGGTGTGTGAGACAACAGGGAAAAGGGGACGTGGCAAGCGAAAGCGGCGTGATCCCAGAGGGGTTCGAAGATCGTGTGGGCAACAGAGGTTTTGTGATAAGGGGGTGGGCCCCGCAGGTGCAGATACTGAGGCACCGAGCCGTGGGTGCATTCTTGACTCACTGCGGCTGGAATTCCACCCTGGAGGGGCTGGCCGCCGGCTTGGTGATGCTGACGTGGCCAATGGGCGCTGACCAATACACCAATGCTAACTTGTTGGTTAATGAGGTAGGAGTAGGGATCCGAGTTGCTGAGGAGACTCGGAGAGTTCCCGATTCAACTGAGTTGGCTCGGATATTATCAGAGGCAGTGGATGGAAGCAGGCCGGAGAAGGTTCGAGCCATGGAACTACGCGACGCAGCCTTGAGCGCAGCCAATGGAGGCAGCTCTGATAGAGATTTAGACGACTTGGTGGAGCGACTCAAGGAGCTGAAATGTGAAAAGGGCACCAATGGACATGTGCAGGGGCATCCTATTTCTGGGTCCACCGTCCACTAA 1443 0.5239 MLTTAAAHVLLYPFYSSGHIIPILDLATKLLSRGLEVTVLVTPSNLPLLDSLLSKYPSSFQSLVLPLPESGPVSAKNLLFNLRAMTGLSDDIIQWFHSHPNPPVAIVSDFFLGWTHKIACQLGVSHIVFSPSGVLGLSVGYAVWRDRPKNDEPENHDFMVSFPSIPNSPSYPWWQISVLYRNLEDGDPDKEFFRNCMLGNIASWGLVVNTFTELERVYIEAMKKLMGHNRVWAVGPLLPAPEDDDAKRGGSSAVPSHKVLSWLDQCENDSVVYICFGSRTSLPNQQMVVLAAALEASGVNFIWCVRQQGKGDVASESGVIPEGFEDRVGNRGFVIRGWAPQVQILRHRAVGAFLTHCGWNSTLEGLAAGLVMLTWPMGADQYTNANLLVNEVGVGIRVAEETRRVPDSTELARILSEAVDGSRPEKVRAMELRDAALSAANGGSSDRDLDDLVERLKELKCEKGTNGHVQGHPISGSTVH* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0457 480 Gene3D Glycogen Phosphorylase B; 8 445 - -
Vvi17g0457 480 PANTHER GLYCOSYLTRANSFERASE 7 452 - -
Vvi17g0457 480 FunFam Glycosyltransferase 260 441 - -
Vvi17g0457 480 Gene3D Glycogen Phosphorylase B; 257 440 - -
Vvi17g0457 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 458 - -
Vvi17g0457 480 CDD GT1_Gtf-like 7 456 IPR002213 GO:0008194
Vvi17g0457 480 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 264 402 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0457 Vvi-Chr17 5148100 5149542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0457 7 463 Glycosyltransferase AT1G73880 47.983 2.06e-147 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0457 - - vvi:100264439 962.985