Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0456 ATGTGCAGCCTATTTGCTTCTTATCATGGTCACCTAATGGGAAATATATGGCCACTGCTGGTTTGGGATAGGCAGATTCTGATCTGGGATGTTGATCAAAGGCAGGATATTGACAGGCAGAAATTTGACGATAGAATATGCTGTATGGCATGGAAGCCAAATGGAAATGCTTTAGCTGTTATTGATGTTATGGGAAAGTATGGTGTGTGGGAATCGGCTGTTCCTTCATCAATGAAATCTCCAACAGAAGATGTTCCTAGTTTGCAGTCAAAGAACAGTAATGGGCTCCTCTTGTTTGATGAGGATGAACAGGAGCCAAGTGCATCTGGCAGTTTGAGCGATCTTGGCGAAGATAGCCATGGAGAATCAGAACCGCCTAGCCGGAAAAGATTAAGAAAACAGTCTACATATGATGAAGATATTAATGATGATTTGCTGAGCTCACTTCCAAAGGTTGAGTCCCGTAAAAAGGCTTCTCATAGTCACAAGGAAAGCTTGAATAATGGGAATGAAGGGCTAAAAAGTACAACATCTGCAAGGCTGAAAATGCAGGAGGCTTTTCAGCCAGGAGCTACTCCTGTGCAACCTGGAAAAAGGCGCTTTCTTTGCTACAATATGCTTGGAAGTATAACCACAATTGAGCATGATGGCTACTCCCACATAGAGATAGACTTTCATGACACTGGCAGTGGTCCACGAGTTCCAGCAATGACTGATTATTTTGGTTTCACAATGGCTTCATTGAATGAGCATGGAAGTGTTTTTGCAAATCCATGCAAGGGTGAGAAGAACATGAGTACTCTTATGTATCGTCCATTCAGTACCTGGGCAAATAACAGTGAGTGGTCTATGCGGTTTGAGCAAGAAGAAGTGAAGGTTGTGGCACTTGGCTCTGCATGGGTGGCTGCCGTGACTAGTCTTAATTTCCTTCGCATCTTCACTGATGGTGGCTTGCAGAGATATGTCATCTCCCTTGATGGGCCAGTGGTGACTGCATCAGGCTTTAAGGATGAACTTGCAGTTGTCACTCATGCCTCTCACTGTCTTCCATCAAATGACCAGATGCTAAAGTTCAGAGTGTTCAACATTTCTAATGGGACACAGCCCCTCAAAGGGCATGTGCCATTAACTCCTGGTTCATGTCTGACATGGTTTGGGTTCAGTGAAGAGGGCCAACTAAGTTCTTATGATTCTAAGGGAGTGCTGAGAGTGTTCACAAACCAATTTGGTGGCAGTTGGCTCCCACTCTTCAGTGCTAGTAAAGAGAAGTCAGAGGAGAACTACTGGGTGGCTGGATTGAACATGAACAAGTTGTTTTGTATTGTTTGCAAATCTCCTGATTTGTTCCCACCAGTGATGCCCAAGCCAGTTCTCACTCTTCTGGATCTTTCATTTCCTCTTGCAACCTCTGATCTGGGAGCAGAAACCCTTGAAAATGAGTTTATTTTGAAAAACATGCATCTATTGCAGATTCAACAAAGAATTGAAGAAATGGCTGCTGCAGGCCTGGACACTACTTCACTTGATGATGAGGCTTTCAATGTAGAAACTGCTCTTGACAGATGCATCTTGAGGCTGATTGCATCCTGCTGCAATGGAGATAAGATTGTGAGGGCCACTGAACTTGTAAAACTTTTATCACTGGAAAAATCAGTTAAGGGTGCGATAAAGCTTGTTACAGCCCTAAAACTACCAAATTTGGCAGAGCGGTTTAATAGTATATTGGAGGAAAGGCTACTCAATGAGACCTCCAGGCCTGCAACCCTCCCACTCACAAGCTCAAACCATGATGCATCCACCACACCTGATGTTGTAATGAGCAAGTTCTTAACTTCTATCCAAAGCAGTAAACCATCCCAACCTGTAATTCCCTTACCCTCGCCTCAACTGTCCTCTCCTCTCTTTGCAAAGAAAGGGAAACTACAAGAGGGAGCTAAAGTTGGAAATGAGAAAGTGGAACAACGCCGAACTGCAATTGTGGAGAACATAGGGAAGGTAAAGAGTTTAGCAGAGGTCAAGAGTATCGAAGATGTGACGAATCAAGGAGAGGCTAGTATAGGTGAGATAAAAAATGGTGCAGTAAATCAGCGCCCCTCTAATCCATTTGCAAAGTCATCAAGTAATCAGGAGAAATCCTCTTTATTTGATGCTATCAAGAAGATGAAGAAGGTTGATGAGACGGGTAAAAGATAG 2193 0.4355 MCSLFASYHGHLMGNIWPLLVWDRQILIWDVDQRQDIDRQKFDDRICCMAWKPNGNALAVIDVMGKYGVWESAVPSSMKSPTEDVPSLQSKNSNGLLLFDEDEQEPSASGSLSDLGEDSHGESEPPSRKRLRKQSTYDEDINDDLLSSLPKVESRKKASHSHKESLNNGNEGLKSTTSARLKMQEAFQPGATPVQPGKRRFLCYNMLGSITTIEHDGYSHIEIDFHDTGSGPRVPAMTDYFGFTMASLNEHGSVFANPCKGEKNMSTLMYRPFSTWANNSEWSMRFEQEEVKVVALGSAWVAAVTSLNFLRIFTDGGLQRYVISLDGPVVTASGFKDELAVVTHASHCLPSNDQMLKFRVFNISNGTQPLKGHVPLTPGSCLTWFGFSEEGQLSSYDSKGVLRVFTNQFGGSWLPLFSASKEKSEENYWVAGLNMNKLFCIVCKSPDLFPPVMPKPVLTLLDLSFPLATSDLGAETLENEFILKNMHLLQIQQRIEEMAAAGLDTTSLDDEAFNVETALDRCILRLIASCCNGDKIVRATELVKLLSLEKSVKGAIKLVTALKLPNLAERFNSILEERLLNETSRPATLPLTSSNHDASTTPDVVMSKFLTSIQSSKPSQPVIPLPSPQLSSPLFAKKGKLQEGAKVGNEKVEQRRTAIVENIGKVKSLAEVKSIEDVTNQGEASIGEIKNGAVNQRPSNPFAKSSSNQEKSSLFDAIKKMKKVDETGKR* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0456 730 PANTHER WD REPEAT AND HMG-BOX DNA BINDING PROTEIN 23 713 - -
Vvi17g0456 730 Gene3D - 18 109 IPR015943 GO:0005515
Vvi17g0456 730 MobiDBLite consensus disorder prediction 715 730 - -
Vvi17g0456 730 MobiDBLite consensus disorder prediction 681 730 - -
Vvi17g0456 730 MobiDBLite consensus disorder prediction 681 714 - -
Vvi17g0456 730 MobiDBLite consensus disorder prediction 103 174 - -
Vvi17g0456 730 Pfam Minichromosome loss protein, Mcl1, middle region 186 467 IPR022100 -
Vvi17g0456 730 MobiDBLite consensus disorder prediction 117 164 - -
Vvi17g0456 730 SUPERFAMILY Putative isomerase YbhE 22 415 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0456 K11274 - vvi:100245742 1385.55