Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0450 ATGTGGAGTCAGGGAACGGAGCAATTTGAGGTTCTAAGAAGAATGATAGATCTCTGTATTTGGAAGTTCAATTTGGGGACACTAAATGAAAAAATTGGCTTCAATAAGGAGATTATATCAAGGGGAAGATTTGCTGAGCTCACTGCAGCTGAACTGCGGCCTTTCAGACCAGATGAAGCAGAACTCTTTGCCAAGTCTGCCTGGAATGCATATAAACAATTTCGCGACAAGACGGCTTTTTCAAGATCAATGGCTGTAGATAAGATGGAGGAGAAAGCTCAAGGGAGAGTTTGGACTGGTAAAGATGCAGCTTCACGAGGTTTGGTTGATGCTATTGGTGGGCTCTCTCGTGCTGTTGCTATAGCAAAACAGAAGGCAAATATACCTCAAGACGCACCGGTTGGTTCTTATGTATATCCTTCTTGTAATACTCATTGCTATAGCTAA 447 0.4251 MWSQGTEQFEVLRRMIDLCIWKFNLGTLNEKIGFNKEIISRGRFAELTAAELRPFRPDEAELFAKSAWNAYKQFRDKTAFSRSMAVDKMEEKAQGRVWTGKDAASRGLVDAIGGLSRAVAIAKQKANIPQDAPVGSYVYPSCNTHCYS* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0450 148 Pfam Peptidase family S49 22 128 IPR002142 GO:0006508|GO:0008233
Vvi17g0450 148 SUPERFAMILY ClpP/crotonase 54 114 IPR029045 -
Vvi17g0450 148 PANTHER PROTEASE 4 22 138 - -
Vvi17g0450 148 Gene3D - 56 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0450 Vvi-Chr17 5013390 5014360 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0450 K04773 - vvi:100262763 206.453