Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0442 ATGGATCTATATTCAGCCTCTGTAGAAGACTTTGAAACGTATCATTCAAAAGACATCTTAGCTACTAGTATTCTAACAATGTTGGTCATGCTCTCCATTTTTCTTTCCATCTTCCTATCTTTTTATTCCCAGCTGCATCTTTCCAGTGGAGAACATGTTACTTACAAAGCTCAATTCTTAGAGAGGCTCCCTCTCCCAGCAACAGGGCCTGAGTCCATTGCTTTTGATGCTGCAGGTGGAGGCCCCTACACTGGTATCTCCGACGGTAGAATCCTCAAATATGTGAATGGCAGCGTTGGGTTCGTGGAGTTTGCCATCACTTCATCTAACAGTTCCGAGGAATTCTGTGTTGGCAACGGTAGTGTTGCATTGGATTTCACCTGTGGCCGCCCATTCGGTCTGGGGTTCCACTATCAAACTGGTGATCTCTACATCGCTGATGCTTACTATGGGCTTATGGTGGTTGGTCCCAATGGTGGGGTTGCTACCCAACTAGCCAATGCTGCAGATGGCGTTCCTTTTGGGTTCACTAATGCTCTGGACGTCGACACCGAAACTGGAATGGTTTATTTGGTGGATTACAGTTCTCAATTTTCTGTCAACGAATTCAGTGTCTCGCTCCAAGCCCATGACATGACCGGAAGGCTAATGAAATATGACCCAGAAAGCAAGGAGCTGACGGTGCTGTTAGGAGGACTCGGGGGAGCGGCTGGAATGGCAATAAGCAAGGATGGCTCCTTCATTCTCATTACAGAGACCGTCACTAAGAGAATTCGAAAGTTCTGGCTGCAAGGCCCAAAAGCTACTACTTCAGAAATTCTCAAGGAATTCACTGTAAGACCGGCCAACATTAAGAGGAATGAAGAAGGAGAGTTTTGGGTTGCCTTTCTTGTTGCAGATGAAACAGGCAGCTGTCCATCACAGCAGCAATCTCCAGGGCTAAGAATTAGTGGAGATGGCATGATTTTGGAGGCAATCTCCCTTGACACACAGAGTGGTATTAGTGAAGTTGCAGTTTATAATGGAAAAATGTATATAGGGTCTCCCTTCTTGCACTTCGTTGATGTTTATGCATGGGCTTCAGAGTGTCACCGGAGAGAATGA 1104 0.4611 MDLYSASVEDFETYHSKDILATSILTMLVMLSIFLSIFLSFYSQLHLSSGEHVTYKAQFLERLPLPATGPESIAFDAAGGGPYTGISDGRILKYVNGSVGFVEFAITSSNSSEEFCVGNGSVALDFTCGRPFGLGFHYQTGDLYIADAYYGLMVVGPNGGVATQLANAADGVPFGFTNALDVDTETGMVYLVDYSSQFSVNEFSVSLQAHDMTGRLMKYDPESKELTVLLGGLGGAAGMAISKDGSFILITETVTKRIRKFWLQGPKATTSEILKEFTVRPANIKRNEEGEFWVAFLVADETGSCPSQQQSPGLRISGDGMILEAISLDTQSGISEVAVYNGKMYIGSPFLHFVDVYAWASECHRRE* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0442 367 Pfam Strictosidine synthase 178 265 IPR018119 GO:0009058|GO:0016844
Vvi17g0442 367 PANTHER STRICTOSIDINE SYNTHASE-RELATED 31 349 - -
Vvi17g0442 367 Pfam Strictosidine synthase-like, N-terminal 60 93 - -
Vvi17g0442 367 Gene3D - 54 366 IPR011042 -
Vvi17g0442 367 SUPERFAMILY Calcium-dependent phosphotriesterase 53 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0442 Vvi-Chr17 4822168 4826194 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0442 - K01757 vvi:100250762 660.988