Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0441 ATGTCGATCGAGATCTTCGTGAACCCCACAAGTACTGTTGCCATGATCTCCATTTTCTTACTACTCTTCTTCTCTGTTCCTCACACGGTTCTTACCTTATCATTCTTTACCCAGCTTCAATTGCCACCCAATGTCACAGGCCCTGAGGCCCTTGCCTTTGACCGGCTCGGTGGAGGACCCTACACCGGTGTCTCCGATGGTAGAGTTCTTAAATATGGAGGCCCTAGTGCTGGTTTCACAGATTTTGCCTACACTACACCAACTAGGTCCAAGGCAGTCTGTGATGGCACAACCGACCCTAATTCAGGACCTACCTGTGGAAGGCCGTTGGGGGTGGGATTCAATAATCTGACCGGCCAGCTGTATATTGCTGATGCTTATTCTGGACTCCTGGTGGTTGGATCTAATGGAGGGCTTGCAACCCCAGTAGCCACTACTGCAGAAGGGGTACCCTTTCGCTTCCTTAATGGTTTGGACGTCGACCAACTCACTGGAAATGTTTATTTTACAGACGCAAGTTCAGTCTACGAGCTAAGGGACATCACACAGGGAGTTGAGAACAATGATGCATCTGGAAGGTTATTAAAATATGACCCCAGTACCAAGCAAGTAACTGTACTGATAAGAGGGCTTTCTGGGCCAGCTGGGGCTGCAGTTAGTAGAGATGGTTCGTTTGTACTGGTTTCAGAGTTCATCGCTAACAGAACACAGAAGTTTTGGCTGAGAGGTCCAAAGGCTAATACATCAGAGCTTTTCTTCACCTTTCAGGGCAGGCCTGATAACATTAAGACGAGTATTACAGACACTTTCTGGGTGGCAGTGAACATCGGAAAGTCTGTGCCGACCACTGTGCCCACCGGACAACGGATGGACGCCCATGGCAATGTTCTTCAAACAGTGAATTTTGAGGCTGAATACGGCTCTACTATGATCAGTGAAGTACAAGGGCGTGGGGAGATATTCTTGTATGTTGGATCACGCGATGCCAGCTATGTTGGAGTTTATACCCTAAAAGATGTCTTGAAAAAATGA 1032 0.4777 MSIEIFVNPTSTVAMISIFLLLFFSVPHTVLTLSFFTQLQLPPNVTGPEALAFDRLGGGPYTGVSDGRVLKYGGPSAGFTDFAYTTPTRSKAVCDGTTDPNSGPTCGRPLGVGFNNLTGQLYIADAYSGLLVVGSNGGLATPVATTAEGVPFRFLNGLDVDQLTGNVYFTDASSVYELRDITQGVENNDASGRLLKYDPSTKQVTVLIRGLSGPAGAAVSRDGSFVLVSEFIANRTQKFWLRGPKANTSELFFTFQGRPDNIKTSITDTFWVAVNIGKSVPTTVPTGQRMDAHGNVLQTVNFEAEYGSTMISEVQGRGEIFLYVGSRDASYVGVYTLKDVLKK* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0441 343 Pfam Strictosidine synthase 156 243 IPR018119 GO:0009058|GO:0016844
Vvi17g0441 343 Gene3D - 30 342 IPR011042 -
Vvi17g0441 343 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 33 286 - -
Vvi17g0441 343 Pfam Strictosidine synthase-like, N-terminal 36 71 - -
Vvi17g0441 343 PANTHER STRICTOSIDINE SYNTHASE-RELATED 14 326 - -
Vvi17g0441 343 SUPERFAMILY Calcium-dependent phosphotriesterase 26 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0441 Vvi-Chr17 4820279 4821543 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0441 - K01757 vvi:100259372 654.055