Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0440 ATGTTCTATCCTTTGTTCCTTTTTTTCTTCTTGTTTTCTCATGGAAATCTGTCCTTTGGAGACAATTCTAGTAGCCTATTTCGATCCTTTCGAATGCTCCACCTCCCAACCCCCACAATAGGTCCCGAGGCCCTTGCCTTTGATTGCTCTGGTGCTGGCCCGTATGCTAGTGTAGCAGATGGGAGAGTTCTTAAGTGGCAGGCTGAATCTGCTGGTTTTGTGGATTTCACGGTTGCTTCTCCGTCTAGGTCCAAGCAACTGTGTGATGGTTCAAGTGATCCTGCAAAGGAACCCACCTGTGGGAGACCATTAGGAATAGGTTTCAATAACAAAACAGGTGATCTCTACATCGCTGATGCCTACTATGGCCTCTTCGTTGTTGGTCCCGACGGTGGAAGAGCCACCCAACTTGCCACTGAAGCAGAAGGTGTTCCGTTTAGGTTTCTTAATGCTGTAGATGTCGACCAGGAAACTGGCATAGTTTATTTCACAGATGCTAGTGCTCGCTTTCAAAGAAGGGAATTTCAAAACGCTGTTCTAGCAGGAGACATGACTGGGAGGCTAATGAAATATGATCCAAGAACCAAACAAGTCACAGTGTTGTTAAGAGGCCTGGGTCTTGCAGTTGGAGTGGCAATAAACAAAGATGGGTCATTCGTCCTGGTTTCTGAGTTTATTGCCACCAGAATCCAAAGATATTGGCTTAGAGGCCCCAAAGCGAACACCTCAGAACTTTTCCTGAAACCTACAGGCACCCCAGATAACATTAAGAGGAATGCAAGAGGAGAGTTTTGGGTGGCTGCGAATATAGGAGCAGAAATGGCTGCAGCTGCGCCTTTGGGGCTTAGGGTTAGCGAAGAAGGGAAGATTTTGCAGGTGGTGGCCTTTGATACAGGAGATATAACTAGGACCATCAGTGAAGTTCATGAGTATAATGGAGCATTATATGTAGGGTCTCTGGCTTTGCCTTTTGTTGGTGTTTTTACCTTCTAG 993 0.4622 MFYPLFLFFFLFSHGNLSFGDNSSSLFRSFRMLHLPTPTIGPEALAFDCSGAGPYASVADGRVLKWQAESAGFVDFTVASPSRSKQLCDGSSDPAKEPTCGRPLGIGFNNKTGDLYIADAYYGLFVVGPDGGRATQLATEAEGVPFRFLNAVDVDQETGIVYFTDASARFQRREFQNAVLAGDMTGRLMKYDPRTKQVTVLLRGLGLAVGVAINKDGSFVLVSEFIATRIQRYWLRGPKANTSELFLKPTGTPDNIKRNARGEFWVAANIGAEMAAAAPLGLRVSEEGKILQVVAFDTGDITRTISEVHEYNGALYVGSLALPFVGVFTF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0440 330 Gene3D - 24 330 IPR011042 -
Vvi17g0440 330 SUPERFAMILY Calcium-dependent phosphotriesterase 32 328 - -
Vvi17g0440 330 Pfam Strictosidine synthase 150 237 IPR018119 GO:0009058|GO:0016844
Vvi17g0440 330 PANTHER STRICTOSIDINE SYNTHASE-RELATED 5 322 - -
Vvi17g0440 330 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 28 279 - -
Vvi17g0440 330 Pfam Strictosidine synthase-like, N-terminal 29 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0440 Vvi-Chr17 4815733 4817448 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0440 - - vvi:100854093 639.032