Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0439 ATGCCTACAGCCATTAGCGAAGTTCAGGAATACAAGGGAGCATTATATATAGGGGAGTTCATGCTTGCAGTTCAAACTGGAGACATGACAGGAAGACTAATGAAATATGATCCCAGAACTCAAGAAGTCACAGAATTGCTAAGAGGCCTTGGTGGAGCAGGTGGAGTGACAATAAGCAAAGATGGGTCATTCATCCTTGTTACAGAGTTCGTCACTAACAGGATCCAAAGGTTTTGGCTTAAAGGCCGTAAAGCCAATACCTCACAACTTTTTCTGAAACCTCCAGGCACGCCAGATAACATTAAGAGCAATGCAAGAGGAGAGTTTTGGGTAGCTGTGAACATTGGAGCAGGAACGGCAGTTGTGCCTTTGGGGCTTAGACTAAGTGAAGAAGGGAAGGTATTGCAGATGGTGGCTTTTGGGGTCCTTCCTTTTACCTTGTTCAACAAACTCCAATTGCCATCATCCATTACGGGTCCAGAGTCCCTCGCATTCGACTTGAAAGGTGAAGGGCCCTACACCGGTGTTTCCGATGGTAGAGTCCTCAAATATCAGGGGCCTGCTGTTGGTTTCACAGATTTTGCCGTCACTTCACCAAATAGGACCGAGGAAATGTGTGATGGCTCAATTGATCCAGCATTGGAAGCCACCTGTGGGAGGCCATTAGGCTTGGGTTTCAACTATCACACAGGCGATCTCTACATGGTTGATGCTTATTTGGGACTCATGGTGGTGGGTTCCAGTGGAGGGATTGCTACCCAACTTGCTGCTGCTGCAGAAGGCATCCCCTTTCGGTTTCTAGCAGGTCTGGACGTGGACCAAGGAAATGGAATGGTCTATTTTACAGAAGCTAGCACTCGATTCCAGTTAAGGGATATGCAGGAACTAATTGCAAGCAATGACAGTACAGGAAGCCTATTTAGGTATGATCCGCAGAGCAGGGAGGTGAGAGTATTGCTCGGGGGCCTTTCTGTGGCAGTTGGGGTGGCAGTAAGCAGAGATGGTATGTTTGTGCTTGTTGCTGAGTTAACTGCAAACAGAATCCGTAGGTTTTGGCTTGGAGGTCCGAAAGCTAATACTTCAGAAGTTTTCATGGAACTCCTGGGAAAACCAAGTAACATTAAGAGGAACGAAAGGGGAGAGTTCTGGGTGGCAATAAACAATGCATTAGGACCACCGGCACCTCCAGAATCACTTGTGATGCCTCTAGGGCTAAGACTCAGCAATGATGGCAGGGTTTTAGAAGTAGCTCCTCTCGTTGGGGCATATCAAATCAGTGCGATCAGTGAAGTTCAAGAGCGTAATGGGGAATTATATGTAGCATCTCTGGTTGCAGCTTATGCCAGCATTTACAGGACTTAG 1362 0.4714 MPTAISEVQEYKGALYIGEFMLAVQTGDMTGRLMKYDPRTQEVTELLRGLGGAGGVTISKDGSFILVTEFVTNRIQRFWLKGRKANTSQLFLKPPGTPDNIKSNARGEFWVAVNIGAGTAVVPLGLRLSEEGKVLQMVAFGVLPFTLFNKLQLPSSITGPESLAFDLKGEGPYTGVSDGRVLKYQGPAVGFTDFAVTSPNRTEEMCDGSIDPALEATCGRPLGLGFNYHTGDLYMVDAYLGLMVVGSSGGIATQLAAAAEGIPFRFLAGLDVDQGNGMVYFTEASTRFQLRDMQELIASNDSTGSLFRYDPQSREVRVLLGGLSVAVGVAVSRDGMFVLVAELTANRIRRFWLGGPKANTSEVFMELLGKPSNIKRNERGEFWVAINNALGPPAPPESLVMPLGLRLSNDGRVLEVAPLVGAYQISAISEVQERNGELYVASLVAAYASIYRT* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0439 453 Gene3D - 145 453 IPR011042 -
Vvi17g0439 453 Gene3D - 18 144 IPR011042 -
Vvi17g0439 453 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 146 395 - -
Vvi17g0439 453 SUPERFAMILY Calcium-dependent phosphotriesterase 12 143 - -
Vvi17g0439 453 Pfam Strictosidine synthase 19 82 IPR018119 GO:0009058|GO:0016844
Vvi17g0439 453 Pfam Strictosidine synthase 269 355 IPR018119 GO:0009058|GO:0016844
Vvi17g0439 453 Pfam Strictosidine synthase-like, N-terminal 151 183 - -
Vvi17g0439 453 PANTHER STRICTOSIDINE SYNTHASE-RELATED 148 443 - -
Vvi17g0439 453 SUPERFAMILY Calcium-dependent phosphotriesterase 150 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0439 Vvi-Chr17 4808549 4814566 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0439 - K01757 vvi:100249157 610.527