Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0438 ATGGCCATCATCTTCAGCCCATCTACTGAGGTCTTCCTCTCCATTTTCATCCTTTTCTTATGTTTTCCCGCCAAGGTTTGTTCTCTTTCGTCCTTTACCCAACTCCAATTGCCGCCAAATGTTACAGGTCCCGTGTCCCTTGCCTTTGACCTGACTGTTGGAGGACCCTATGCTGGTGTCAATGATGGTAGAATTATCAGATATGGAGGAACTGACGTTGGTTTCACAGATTTTGCCTTCTGTACACCGACCAGGTCCAAGGCAGTGTGTGATGGCACTACAGACCCAGATTCAGGACCCACGTGTGGAAGACCATTAGGTTTGAGTTTCAACAATCTAAGGAACCAGATGTACATTGCCGATGCGTATTCCGGGCTCTTTGTGGCGGGTACTAATGGAAGGCTTGCAACCAAACTTGCAACAAGTGCAGAAGGGGTGCCCTTCTGCTTCCTTAATGGTTTAGACGTTGACCCATTGTCCGGGCTGGTCTATTTTACAGACTTCAGTACTACAATCCAGCTAAGAAACATTTCACGGGCACTCGCAAGTGGCAACACAACTCAATTTTCCAGCGATGCAACTGGAAGGCTATTAAGATATGACCCAGAGACAAAGAATGTTACCGTGTTGTTGAGAGGCCTCTCTGGAGCGGCGGGGACTGCAGTCAGCAATGATGGAATGTTTGTTCTCGTCTCAGAGTTCAATGCTAACAGAATTCTGAAGTTTTGGCTTAGAGGTCCTAAAGCATCTACAGCAGAAACTTTCGTAAGTTTCCGGGGAAGGCCAGTTAACATTAAGAGGACTGCATCAGGAAATTTTTGGGTGGCAGTGAATGTCCCAAATAATCAATCTCCACCAACCACAATTCTCACAGGACAAAGGATCAGTTACTACGGAACCATATTGGAAACAGTGAGTTTTGATGATCAATATGGTGGATCTACTTTGATCACTGAGGTGCAACAGCATCTTGGGGCATTATATATTGGAGCAAACTCCGCAAATTTTGTTGGTGTCCACATGGCTTAG 1029 0.4587 MAIIFSPSTEVFLSIFILFLCFPAKVCSLSSFTQLQLPPNVTGPVSLAFDLTVGGPYAGVNDGRIIRYGGTDVGFTDFAFCTPTRSKAVCDGTTDPDSGPTCGRPLGLSFNNLRNQMYIADAYSGLFVAGTNGRLATKLATSAEGVPFCFLNGLDVDPLSGLVYFTDFSTTIQLRNISRALASGNTTQFSSDATGRLLRYDPETKNVTVLLRGLSGAAGTAVSNDGMFVLVSEFNANRILKFWLRGPKASTAETFVSFRGRPVNIKRTASGNFWVAVNVPNNQSPPTTILTGQRISYYGTILETVSFDDQYGGSTLITEVQQHLGALYIGANSANFVGVHMA* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0438 342 Gene3D - 25 342 IPR011042 -
Vvi17g0438 342 PANTHER STRICTOSIDINE SYNTHASE-RELATED 27 330 - -
Vvi17g0438 342 Pfam Strictosidine synthase 152 246 IPR018119 GO:0009058|GO:0016844
Vvi17g0438 342 SUPERFAMILY Calcium-dependent phosphotriesterase 15 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0438 Vvi-Chr17 4806535 4807901 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0438 - K01757 vvi:100243986 687.182