Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0437 ATGCTCTTCCTTTTCTTATTTCTCTTCTCATTCCCTTCAACTATTCTTTCCAATCGGATCTTTATCAAGCTCCCATTGCCAAAGAATGTGACAAGTCCTTACTCCTTTGCCTTTGACCAGCTCGGCGGAGGGCCCTACACTGGTGTCACAGATGGTAGGATTTTCAAATATGGAGGGCCTAAAGTTGGCTTCACAGAATTTGCCTTCACGGCACCAAACAGGTCCAAGGAAGTATGTGATGGCACAAGGGACATAAATTTGGGACCCATCTGCGGAAGGCCATTAGGCTTGGGTTATGACCATTCATCTAACCAACTGTACATCGCTGACGCTTATTTTGGCTTATTGGCGGTGGGATCCAATGGAGGACCTGCAACCCAAGCTGCTACCAGTGCAGAAGGAGTGCCCTTTCGCTTCCTTAGTGGTTTGGACGTTGACCCAGTAACCGGTACAGTTTACATTACGGACTTCAGTACTGAATACGAGCTAAGGTACTTTGCTGATAGGTTTTCTTCACGACACAACTGGAAGGTTATTAAAATATGA 546 0.4597 MLFLFLFLFSFPSTILSNRIFIKLPLPKNVTSPYSFAFDQLGGGPYTGVTDGRIFKYGGPKVGFTEFAFTAPNRSKEVCDGTRDINLGPICGRPLGLGYDHSSNQLYIADAYFGLLAVGSNGGPATQAATSAEGVPFRFLSGLDVDPVTGTVYITDFSTEYELRYFADRFSSRHNWKVIKI* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0437 181 SUPERFAMILY Calcium-dependent phosphotriesterase 4 159 - -
Vvi17g0437 181 Gene3D - 14 180 IPR011042 -
Vvi17g0437 181 PANTHER STRICTOSIDINE SYNTHASE-RELATED 6 166 - -
Vvi17g0437 181 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 3 14 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0437 Vvi-Chr17 4802273 4803138 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0437 - K01757 vvi:100266318 327.02