Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0435 ATGGAAGGCAGCGAAAGCGAAGCCATTTTTGAATCTCTAAACCTCAATCCCCAGCTCTTCATCAATGAAGTCCTTAACCTAGTCGATGATTTGCTTGATGGAGCTTTTGATTTCTATCAACAGGAAGCATCGAATCTTTTGAGAACGGACGGAACCGATCGCTCTGGTGATATAAACAAGGGTATTGGTTATATTCGTAATATGATTCAAGGAGTTTTGGATAAGCGGCTGGAGATGTGGGAGAAGTATTGCCTAAGACACTGTTTTGCTGTTCCTGAGGGATTCTTGATGCCTAAAGCTAGTGAAACACCTGGTGACAGTTCAATTAACAAAGATGTGCTGTCTGGTCTCGAGCTGGATGCGCAGTTGGATTCATTGAGGGATAAACTTACAGTGGTTGCAAAGGAATCTGCTGAGCTGAACAGAGAGCTCCAAGCATTGGAAAGGCAGTCTGTCTTAAGCAATCAATGTACTGGGTCTGTTAATGAGGCATTGCAGTTATATGAACAAAACAAAGTGCATGACATGTTTCAGGAGATGATGAGAACTGCATCAGAACTTCGTACTAAAATGGAGAAGATGAAGACCAAGAGGATGGAAGGGATTGAACGTGTTAAAACAGAGAGGATATACAACCCAGACAGAGATTTGTCTATGAGGAATCGTGACAAAGGCCTATTCAATGCAGAGTTGGAAGATCTTCAAGAATTTTTAGCCAACATAAAGAACATGTGA 735 0.4177 MEGSESEAIFESLNLNPQLFINEVLNLVDDLLDGAFDFYQQEASNLLRTDGTDRSGDINKGIGYIRNMIQGVLDKRLEMWEKYCLRHCFAVPEGFLMPKASETPGDSSINKDVLSGLELDAQLDSLRDKLTVVAKESAELNRELQALERQSVLSNQCTGSVNEALQLYEQNKVHDMFQEMMRTASELRTKMEKMKTKRMEGIERVKTERIYNPDRDLSMRNRDKGLFNAELEDLQEFLANIKNM* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0435 244 PANTHER PROTEIN MIS12 HOMOLOG 3 240 IPR008685 GO:0000278|GO:0000775|GO:0005634
Vvi17g0435 244 Pfam Mis12 protein 9 141 IPR008685 GO:0000278|GO:0000775|GO:0005634
Vvi17g0435 244 Coils Coil 177 197 - -
Vvi17g0435 244 Coils Coil 123 150 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0435 - - vvi:100267948 462.611