Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0434 ATGGCGAAGAAGAGCACATCCATACAAGCCTTATACGACCTCTGCAAAAAGACCTTTTCTCCTTCAGGAACACCTCCTCCTTCTCAAGCTATTCACAAACTCTCCTCTCTTTTGGACACAATTGGTCCTGCTGATGTTGGGCTGAGAGAGGACAATCCAGAGGATGACCGAGGGCATGGCATCTTTGGACTTAATGGATTTAATAGGATAGCTCGATGGGCTCAACCAATAACATACTTGGATATCTTTGAATGTAATAGTTTTACGATGTGCATATTCTGCTTTCCTACTTCTTCAGTTATTCCACTTCATGACCATCCTGGGATGACTGTTTTGAGCAAAGTTCTATATGGCTCCTTGCATGTGAAAGCTTATGATTGGGTTGAGCCTGCCCGCATCCAGAAAGGCAAGGGACCAGGTTACTTTACAGTAAGATTGGCAAAGTTGGCTGTGGATAAAGTTCTAACAGCACCAGTTGGGACCTCGATTCTATATCCTAAGAGTGGGGGGAATCTGCATTATTTCACTGCAATCACTCCTTGTGCTGTGCTTGACGTTCTTGCACCTCCTTACCAAGAAGCTTCTGGCAGGAAATGTACTTACTACCATGACTACCCTTATTCCAGCTTCTCAACTGGAAATGAAGCTGAGATAAGTGGAAAAGAAGAGGACTATGCATGGCTTGCAGAGATAGAAACACCAGATGATCTTTACATGCGCCAGGGTGTATATGCTGGGCCAGCTATTCAGGTTTAG 756 0.4444 MAKKSTSIQALYDLCKKTFSPSGTPPPSQAIHKLSSLLDTIGPADVGLREDNPEDDRGHGIFGLNGFNRIARWAQPITYLDIFECNSFTMCIFCFPTSSVIPLHDHPGMTVLSKVLYGSLHVKAYDWVEPARIQKGKGPGYFTVRLAKLAVDKVLTAPVGTSILYPKSGGNLHYFTAITPCAVLDVLAPPYQEASGRKCTYYHDYPYSSFSTGNEAEISGKEEDYAWLAEIETPDDLYMRQGVYAGPAIQV* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0434 251 SUPERFAMILY RmlC-like cupins 6 204 IPR011051 -
Vvi17g0434 251 CDD cupin_ADO 86 191 - -
Vvi17g0434 251 PANTHER UNCHARACTERIZED 8 248 IPR012864 GO:0016702
Vvi17g0434 251 Pfam PCO_ADO 37 249 IPR012864 GO:0016702
Vvi17g0434 251 Gene3D Jelly Rolls 70 215 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0434 Vvi-Chr17 4785036 4791463 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0434 K23953 - vvi:100261112 524.628