Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0432 ATGAGACGTCCGAGCAATCGCTGGTTTTTATCTCTTTCTCTCTCTAAAAATATATGTTTTCTCTCCTTAAATTTCTTCCTTCTCGCTTTTAGGAAGTTTCTACAAATGCCGCTTCTGGTGGTGGGTGCGTTTCTGTTTGTGGTTTCATTGTGCGGATTGGTCGGGTCGACGTGCAAGGTCAGCTTCCTGCTGTGGATATACCTGTTCGTAATGTTTTTGATGATTCTGGGGCTCTTGTGCTTCACCATATTGGCGCTCGTGGTCACCAACAAGGGCGTGGGTCAGGTGATATCGAACCGAGGGTATAAGGAGTACAGGCTTGGGGATTACTCTAACTGGCTGCAGAATCATTTGGTGAATGACAAGAACTGGGGTCGGATCAAGAGTTGTTTGATGGATACTGACATTTGCACCTCAAATCTTCTAATCTCCACATCATATATTTAA 447 0.4452 MRRPSNRWFLSLSLSKNICFLSLNFFLLAFRKFLQMPLLVVGAFLFVVSLCGLVGSTCKVSFLLWIYLFVMFLMILGLLCFTILALVVTNKGVGQVISNRGYKEYRLGDYSNWLQNHLVNDKNWGRIKSCLMDTDICTSNLLISTSYI* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0432 148 PANTHER TETRASPANIN-8-RELATED 30 139 IPR044991 GO:0009734|GO:0016020
Vvi17g0432 148 Pfam Tetraspanin family 32 131 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0432 Vvi-Chr17 4771717 4773002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0432 31 139 Miscellaneous Gene Families AT4G28050 59.633 1.52e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0432 - - vvi:100250886 221.861