Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0430 ATGGCGGGAAAAACCCTCGACTCCATCACTTCTCAAGACATCGCGGCTCTTGGCATACCCTCCGAAGAGGCTGAGAAGCTCCACCAAACTCTCCTCCAAATCATCACCAGCTGCGGAGCGGCCACTCCCCAGACTTGGAGCCGCATCTCCAAAGAACTCCTTAACCCTGATCTCCCCTACTCCCTTCACCAGATGATGTACTATGGCTGTTACTCTCATTTCGGACCTGATCCTCCCGCTTGGTTACCCGACCCGGAGAACGTGATGTTGACAAATGTTGGCCAATTATTAGAGAGGCGTGGAAAGGAGTTTTTGGGTTCAAGGTATAAGGATCCAATTTCAAGCTTTTCTGATTTCCAGAAATTTTCAGTCTCAAACCCTGAGGTTTATTGGAAAACTGTATTGGACGAACTGAGCATATCATTTTCAGTGCCTCCCCAATGTGTATTATATGATAATCCATCTAGGGAAAATGGCTTGTCTTACCCAGGAGGTCAATGGCTTCCAGGAGCATTCATAAATCCTGCAAGGAATTGCTTGAGTGTGAATGATAAGAGAACTCTGGATGACACCGTGGTAATATGGCATGATGAAGGAGATGATGGGATGCCTATAAATAGGATGACCCTTGAGGAATTGCGTAGAGAGGTTTGGTCAGTTGCATATGCTCTCGACACACTGGGTTTGGAGAAAGGATCCGCGATTGCAATCGATATGCCAATGAATGCCAGTTCTGTGGTTATCTACCTAGCTATTGTCCTTGCGGGCTACATAGTTGTATCTATTGCAGATAGTTTTGCTTCACGTGAGATCTCAACAAGGCTTAAAATATCTAATGCAAAAGCAATATTTACTCAGGATTTTATCATTCGTGGTGACAAAAGTCTACCTTTGTATAGTAGAGTTGTTGATGCACAATCACCTACCGCGATTGTTATCCCAGCTGGAGGCTCTAGCTTCAGCATGAAATTGCGTGATGGTGACATGTCATGGCATGATTTTTTGCAAAGAGCAATAAATTCTAGAGATGATGAGTTTGCTGCAATAGAACAACCGATAGAGGCATTCATGAACATCCTCTTCTCATCCGGAACTACAGGGGAGCCAAAGGCAATTCCATGGACCAATGCTACTCCTTTGAAGGCTGCTGCAGATGCATGGTGCCACATGGATATCCGAAAAGGTGATATTGTTGCCTGGCCCACTAATCTTGGGTGGATGATGGGTCCTTGGCTAGTTTATGCTTCATTGTTGAATGGGGCAACCATTGCTTTATATAATGGAGCCCCCCTTGGTTCTGGATTTGCCAAATTTGTACAGGATGCCAAGGTAACAATGCTTGGTGTGATCCCAAGTATTGTTCGGACATGGAAAAGTACAAATTGCACAGCAGGTTTAGATTGGTCAAGCATCCGGTGCTTTGCCTCTACTGGCGAGGCATCCAGTGTAGATGAATACCTTTGGTTGATGGGGAGAGCCCAGTACAAGCCTATCATCGAGTATTGTGGTGGCACAGAGATTGGTGGTGGTTTTGTTACTGGTTCATTACTGCAGGCTCAATCGTTGGCTTCTTTTAGCACACCTGCTATGGGCTGCAGTTTGTTTATTATCGGTGATGATGGGAATCTCCTGCCACAAGATGCATCAGGGATGGGTGAATTAGCCCTTGGTCCCCTTATGTTTGGAGCTTCAACTACACTACTGAATGCTGATCATTATGATGTCTACTTCAAAGGAATGCCCATTTGGAATGGAAAAGTTTTGCGGAGGCATGGGGATGTATTTGAGCGTACTTCTAGAGGATACTATCGTGCGCATGGTCGAGCAGACGATACCATGAATATTGGGGGTATTAAGGTGAGTTCTGTTGAGATTGAGCGCATCTGTAACACAGTCCACAGCAGTGTCCTTGAGACAGCTGCCATTGGGATGCCTCCTCCTGCAGGTGGGCCTGAGCGGTTGATGATCGTTGTTGTATTCAAGGACTCAAATAACTCAATCCCAGATCTGAATGAGTTGAGGATAGCTTTCAATTCAGAAGTGCAGAAAAAACTGAATCCTTTATTCAGGGTTTCTCATACTGTGCCCGTTCCATCTCTTCCAAGGACTGCAACGAATAAGGTTATGAGAAGGGTGTTGCGGCAGCAACTTGCTCAACTTAGCTCAACTTCTAAGTTCTGA 2181 0.4544 MAGKTLDSITSQDIAALGIPSEEAEKLHQTLLQIITSCGAATPQTWSRISKELLNPDLPYSLHQMMYYGCYSHFGPDPPAWLPDPENVMLTNVGQLLERRGKEFLGSRYKDPISSFSDFQKFSVSNPEVYWKTVLDELSISFSVPPQCVLYDNPSRENGLSYPGGQWLPGAFINPARNCLSVNDKRTLDDTVVIWHDEGDDGMPINRMTLEELRREVWSVAYALDTLGLEKGSAIAIDMPMNASSVVIYLAIVLAGYIVVSIADSFASREISTRLKISNAKAIFTQDFIIRGDKSLPLYSRVVDAQSPTAIVIPAGGSSFSMKLRDGDMSWHDFLQRAINSRDDEFAAIEQPIEAFMNILFSSGTTGEPKAIPWTNATPLKAAADAWCHMDIRKGDIVAWPTNLGWMMGPWLVYASLLNGATIALYNGAPLGSGFAKFVQDAKVTMLGVIPSIVRTWKSTNCTAGLDWSSIRCFASTGEASSVDEYLWLMGRAQYKPIIEYCGGTEIGGGFVTGSLLQAQSLASFSTPAMGCSLFIIGDDGNLLPQDASGMGELALGPLMFGASTTLLNADHYDVYFKGMPIWNGKVLRRHGDVFERTSRGYYRAHGRADDTMNIGGIKVSSVEIERICNTVHSSVLETAAIGMPPPAGGPERLMIVVVFKDSNNSIPDLNELRIAFNSEVQKKLNPLFRVSHTVPVPSLPRTATNKVMRRVLRQQLAQLSSTSKF* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0430 726 Gene3D - 102 610 IPR042099 -
Vvi17g0430 726 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 723 - -
Vvi17g0430 726 SUPERFAMILY Acetyl-CoA synthetase-like 118 719 - -
Vvi17g0430 726 ProSitePatterns Putative AMP-binding domain signature. 359 370 IPR020845 -
Vvi17g0430 726 Gene3D - 611 725 IPR045851 -
Vvi17g0430 726 Pfam AMP-binding enzyme 185 615 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0430 Vvi-Chr17 4744628 4762598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0430 1 589 Acyl Lipid Metabolism Gene Families AT5G23050 68.136 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0430 - - vvi:100257673 1451.42