Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0423 ATGGTTATGAAGTTGGTTCTTCTGCTCATCATCTGCTTGCTATGCCTATGCCTATGCTTAACAGCTGAAGCATCAACACCACTTGAATATCTGGTAAAGCCAAATTGTCAGTCTCAATGCGGAAACGTTGTCATTCCCTTCCCATTTGGGATCGGGGAGAGCTGTTATCTGAACGAGTGGTACTCAGTAAATTGCAGCAACACTTCCGGTGCTGCAAAACCCTTCTTAAACCCTACTAAACTCAACCTGGAGCTGCTGAATGTATCACTGGAATACCAAACAGTGACAGTTTATAGTCCCATAGCTTCCTATGATCAGCAGAAAGGGAGCAGCGAGTTGCAGACAAGTATTAATTTAGACCAAAGCCCGTTTCTGTTCTCGACGCTCGATAATATATTCGTGGTGTTGGGTTGTGGCCATGCAAAACTCATGGAGCATGAGAAAATCTGGGCAGGTTGCACCTCCATTAATTGCAGCGATAGTTTTCCTGATCAAGGTTGCTATGGCATCAACTGTTGCCAAACCACAATTCCAACCATAGATAGCTACTATCTGAGCACCTACAGTGTGAAGTTTACCCTAGATGATGAAGGAAACAACCACTCTACCTCCACTCATGCCTTCTTGGTGGACAGAGACTGGTTTTCTCGCAACTTCACTGAACTGGAGGATGTTAGTGTGAAGTATGCTGCGTTATCGTTGTTGTGGATGATAAAAGAAGGGGACAACGCCGACTCTTCTTGTAACGGCTCCAATTACTACAGCTTGTCGATTGGATCTTATGTTCGTTCTTCTTGTGGCTGCCCACCGCGTTACGAAGGCAACCCTTATCTTCACGATGGATGTGATCATGTTGTCAAAGAATGTGCCAACTGTTTGAAGACATGTGATTATCGTTACATAATCGACAATCAAAGTTATCATATTGAGTACTATTGCATCACAAAGGATAGGTTGTCAAGACCTCTAATTCTAGGTAACATCTCCTTTATTTTCATGTCTTCGTAA 1008 0.4335 MVMKLVLLLIICLLCLCLCLTAEASTPLEYLVKPNCQSQCGNVVIPFPFGIGESCYLNEWYSVNCSNTSGAAKPFLNPTKLNLELLNVSLEYQTVTVYSPIASYDQQKGSSELQTSINLDQSPFLFSTLDNIFVVLGCGHAKLMEHEKIWAGCTSINCSDSFPDQGCYGINCCQTTIPTIDSYYLSTYSVKFTLDDEGNNHSTSTHAFLVDRDWFSRNFTELEDVSVKYAALSLLWMIKEGDNADSSCNGSNYYSLSIGSYVRSSCGCPPRYEGNPYLHDGCDHVVKECANCLKTCDYRYIIDNQSYHIEYYCITKDRLSRPLILGNISFIFMSS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0423 335 PANTHER OSJNBA0016N04.9 PROTEIN 4 296 - -
Vvi17g0423 335 Pfam Wall-associated receptor kinase galacturonan-binding 36 98 IPR025287 GO:0030247
Vvi17g0423 335 Pfam Wall-associated kinase 164 252 IPR013695 GO:0004674|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0423 Vvi-Chr17 4656522 4658464 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0423 39 296 Receptor kinase-like Gene Family AT4G31100 30.189 1.43e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0423 - - vvi:100259516 664.455