Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0421 ATGAATTTTCAGGTTACAGATGAAGAAGTGCAAAGGCGGTTTCATGGACCATTTAAGGGAGGGTTTTCTGCTGGTTACTATAATACTGTGGGCTGTAAGGAGGGGTGGGCTCCACAGTCATTTACCTCGTCCTGGAAGAACCAGGCTGAAGTTAAAAAGCAGAGTATGTTTAACTTCTTAGATGATGGTGAGAAAGCGGAAATGGAAGGCTGTTCCCTGGGGACATCTTTTGCAGTTTGA 240 0.4458 MNFQVTDEEVQRRFHGPFKGGFSAGYYNTVGCKEGWAPQSFTSSWKNQAEVKKQSMFNFLDDGEKAEMEGCSLGTSFAV* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0421 79 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 4 76 - -
Vvi17g0421 79 Pfam Protein of unknown function (DUF1604) 4 69 IPR011666 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0421 Vvi-Chr17 4641323 4645881 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0421 K13123 - vvi:100242404 121.709