Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0420 ATGGGAGAGGCCTGTTATGCCAATAGCTGGTACTCCATCAACTGCAACCATGCAAAACCCTTCTTAAACCATACCCGCCTCAATCTGGAAGTGTTGAATATATCACTGGACTACCAAAAGGTGACGGTTAACAGTCCCATATCTTCGTTGTGCAAAGATACAGAGGAGGTGATGACTGAAACGAAGGCAAACATCGACTTGAACCAAAGTCCCTTTTCGTTCTCAAGGCTAGACAACATATTCATGGTGTTGGGTTGCGGCGGTGCACGCCTCATGGACAAATCCAATGAAGCCATGGCATTGGCAAGTTGTGAAACGATATGCGAGAGTGGTTATGTTGATACTAAAATTTGCTACGGCATCAACTGTTGCCAGACCACAATTCCACACGCAAATAATTACTTTCGTAACAACTACAGTGTGAATCTTACAACAGAGAGTAAAGAAACGGGTTGTGTGACACATGCTCTCATGGTGGACGGAGACTGGTTTTCTCGCAACTTTTCGAGTCAAGATGTTATAAAAATGGGATATGCTCCATTGGCACTGGCATGGACGATAGAAGAGAATGACGAGTACGCCAGCTCTCGCTGCAACCGTTCTCTACACTATGACCTTGATAGGGGAACTTATTCTCGGGATCCTTGTACCTGCGGATCGAAGACAGAAGGCAACCCTCACCTCAAAAATGGATGTCAAGGTATGCTTCTTTCTTAA 717 0.4505 MGEACYANSWYSINCNHAKPFLNHTRLNLEVLNISLDYQKVTVNSPISSLCKDTEEVMTETKANIDLNQSPFSFSRLDNIFMVLGCGGARLMDKSNEAMALASCETICESGYVDTKICYGINCCQTTIPHANNYFRNNYSVNLTTESKETGCVTHALMVDGDWFSRNFSSQDVIKMGYAPLALAWTIEENDEYASSRCNRSLHYDLDRGTYSRDPCTCGSKTEGNPHLKNGCQGMLLS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0420 238 PANTHER OSJNBA0016N04.9 PROTEIN 2 235 - -
Vvi17g0420 238 Pfam Wall-associated kinase 116 218 IPR013695 GO:0004674|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0420 Vvi-Chr17 4629167 4629883 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0420 2 232 Receptor kinase-like Gene Family AT1G16130 30.303 5.23e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0420 - - vvi:109124303 503.827