Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0411 ATGGCTAGGAGCAACTCTCAAGATTTCTCCTCCAAGAGACACTTCCACTGGACTAGGAAGGTTAGCAACGAAGATGACGAAACTCCAACCTTCAAATCCTCCTCAAACACTAGTGAGGATGACAAAAAGGAGAACGAAAAGGGCGTGGTGCAAGAGCCATCAGTGGCAGCTCCAGCTGCAGCTCCAGCTCAAGCTCCAGCACAAACACCTACACCAAAGAAGAAACTGCAGGCCGTTGCAGTTTCCAGGCTTCGATCGGTTCTCACCATTTTCGGCAGGAACCGATCACAATTACCACATGGTCTCGGCCCCAGAGTGGTCGGTACTCTTTTCGGGAACCGACGTGGGCACGTACATTTTGCCTTCCAAAAGGATCCCACTTCCCAACCAGCCTTCTTGATTGAACTGGCCACCCCAATAAGTGGATTAGTCCGAGAAATGGCATCTGGGTTAGTTCGAATTGCATTGGAGTGTGACAAAGAAGAAGAGAAGAAGTCAGTTAGACTGCTGGAAGAGCCTCTGTGGAGGACCTACTGTAATGGGAAGAAGTGTGGATTCGCAACAAAGCGCGAGTGTGGACCCAAAGAGTGGAATGTTTTGAAAGCAGTAGAACCAATTTCAATGGGTGCAGGGGTTTTGCCTGGGGAAGGACCTGAAACTGGGTCGGATGGTGAACTCATGTACATGAGGGCCAAGTTCGAGCGAGTTATTGGGTCTAGAGATTCAGAGGCTTTCTACATGATGAACCCTGACAGCAATGGAGCTCCTGAACTTAGCATCTACCTGCTTAGAGTCTAA 798 0.4937 MARSNSQDFSSKRHFHWTRKVSNEDDETPTFKSSSNTSEDDKKENEKGVVQEPSVAAPAAAPAQAPAQTPTPKKKLQAVAVSRLRSVLTIFGRNRSQLPHGLGPRVVGTLFGNRRGHVHFAFQKDPTSQPAFLIELATPISGLVREMASGLVRIALECDKEEEKKSVRLLEEPLWRTYCNGKKCGFATKRECGPKEWNVLKAVEPISMGAGVLPGEGPETGSDGELMYMRAKFERVIGSRDSEAFYMMNPDSNGAPELSIYLLRV* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0411 265 PANTHER PROTEIN MIZU-KUSSEI 1 43 265 IPR006460 GO:0010274
Vvi17g0411 265 MobiDBLite consensus disorder prediction 1 74 - -
Vvi17g0411 265 MobiDBLite consensus disorder prediction 9 27 - -
Vvi17g0411 265 Pfam Protein of unknown function, DUF617 106 264 IPR006460 GO:0010274
Vvi17g0411 265 NCBIfam uncharacterized plant-specific domain TIGR01570 106 265 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0411 Vvi-Chr17 4553296 4554093 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0411 - - vvi:100264587 513.072