Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0410 ATGCCAGTGTCAACAAGGTCTCAGATCTTCGAGCAAAATGAATCCAATCCGGACCATAGAACCCGACCCGGGAACCGCCAAGATGAGACCCGCATTGGTCTTCCATCAAGAAACCCACACCACGGCCTCAAGGAGAAGATGAAAGCTCTAACACTCTTGTATGAGCAGCAGAAGCAAGCTTCAATGGCGCTCAAGAACCCCTCCTCCAAGCCTCAAGACCAGCGCTTTTCCACTCATCCCAGCGTCGAGCTTCTCAATTCCATAAAAGCCGAAGAAAACAAACCAAAACTAGGCAATGTGATGAAAGAAAACACTTTGCCCAATTCCACAATTACAAGAACTTTCGTCTTGCCACTCCCTCCAGTTGATGACGCCAAGGAAAATGTGATCGCGGGTGTCGATCGCATTGTGGGGTTTTCGTGTCCAAGAAGGGCTCCGGTCTCCAACAATGTGGCTCGGAAGCTGTCGATGGTGGCTTCGGAGCCTAGAGGGATTGGAGGGACAAAGAATGTGCAAGAATTGGAGGCTATTTCGGAGAGACCCGGAATTGGGAGTAGAATTCTTGTTTTTGTGAGGCTTAGGCCTATGGCCAAGAAGGAGAAAGAGGCTGGATCGCGGTGTTGTGTGAGAATCGTAAACCGGCGTGATCTTTATCTTACCGAGTTTGCCACTGAGAATGATTATTTGAGGCTGAAGAGGCTTCGGGGAAGACATTTCGCATTCGACGCTTCCTTCCCGGATTCAGCAACGCAGCAAGAGGTTTATTCCACTACAACTGCAGAGCTAGTGGAAGCAGTATTGCAAGGGAGGAATGGGTCAGTGTTCTGTTATGGTGCCACAGGAGCTGGAAAAACATACACAATGCTGGGTACAGTAGAGAATCCAGGAGTGATGGTTTTGGCAATAAAAGATCTCTTCACCAAGATCAGGCAGAGGAGCTGTGATGGGAATCATGTGGTTCACCTCTCCTATCTTGAGGTCTATAATGAAACTGTCAGGGATTTGCTTGCCCCTGGAAGGCCTCTTGTCCTGAGAGAAGATAAACAGGGGATTGTAGCAGCAGGTCTTACTCAATACAGAGCTTATTCTACAGATGAGGTGATGGCATTGCTTCAACAAGGAAACCTAAACAGAACTACTGAACCAACCCGTGTCAATGAAACTTCTTCACGGTCCCATGCTATTCTGCAGGTTGTGGTTGAATACAAAATTAAAGATGCTTCTATGAATATCATTAATCGGGTGGGGAAGCTGTCACTGATTGATCTTGCTGGGTCTGAAAGAGCTCTTGCAACTGACCAGAGGACGCTTAGATCACTTGAGGGTGCCAACATAAATAGGTCGCTCCTTGCACTGAGCAGCTGCATCAATGCCCTTGTGGAAGGGAAGAAGCACATACCCTACAGGAATTCAAAGCTCACCCAACTCCTCAAGGACTCTTTAGGAGGAGCTTGCAACACTGTGATGATTGCCAATATTAGCCCAAGCAACCTCTCATTTGGAGAAACTCAAAACACCCTTCACTGGGCTGATCGAGCCAAGGAGATCCGGAACAAGGCATGTGACACCAATGAAGAAATACAGCAATTACCTGAATCTGAAGCTGATCAGGCCAAGCTATTACTTGAATTGCAGAAAGAGAACAGAGAATTGCGAGTACAGCTTGCACGTCAGCAACAGAAAGTTCTAACCCTTCAAGCACAGTCCTTGGCTGCAAACTGCTCTCCAACCCCATCTTCAGTTACATCTCTGTTGTCTCCTCCATCTTCTATTCAACCAAATGAAAAACGGAAACCCAGATCCTCCTTCTTAGCTGGAAACTGTTTCACACCAGAATCGAAGAGAAAAGGAGCAGAGGAGACAGTTAGAGAGCTTCAGCGGACTGTGAAGGCATTAGAAGCAGAAATGGAGAGAATGAAAAAGGATCATGTGTTTCAGCTAAAGCAGAAGGATGATTTTATACGCGACCTTTCAAGGAAAAGTGGAAAACCATCAGAGGGAGTTGTAGTAGGCCAAGGGGTGAAGAGGGTTGTTACAAGAGCGAGCTTGCGCCCAAAGGAACCAACTGGTGGTGAGTTGAAGAGCCCAAGTCATCGGTTTCTGTCTCCAGCACCAACAGCTAAGAAACGAAGTTTCTGGGACATAACTACAGCTAACAGCCCTTCAGTGGCCACTTTAAATGGAAGAAAAACAAGAAGCCATGTCATTTCTGAGCCTGCTGCAGCTCCCTCAATGCTTCTTCAGCTTGCATATCCATGTTTCTGGTTTGTGTTCATGTTCGGACCACACATGATCAATTGTATCAACCAGCCGGGTTTTCACTCATCAAAAGCCAACGCTTTGAAGCGGTAA 2352 0.4698 MPVSTRSQIFEQNESNPDHRTRPGNRQDETRIGLPSRNPHHGLKEKMKALTLLYEQQKQASMALKNPSSKPQDQRFSTHPSVELLNSIKAEENKPKLGNVMKENTLPNSTITRTFVLPLPPVDDAKENVIAGVDRIVGFSCPRRAPVSNNVARKLSMVASEPRGIGGTKNVQELEAISERPGIGSRILVFVRLRPMAKKEKEAGSRCCVRIVNRRDLYLTEFATENDYLRLKRLRGRHFAFDASFPDSATQQEVYSTTTAELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVENPGVMVLAIKDLFTKIRQRSCDGNHVVHLSYLEVYNETVRDLLAPGRPLVLREDKQGIVAAGLTQYRAYSTDEVMALLQQGNLNRTTEPTRVNETSSRSHAILQVVVEYKIKDASMNIINRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGACNTVMIANISPSNLSFGETQNTLHWADRAKEIRNKACDTNEEIQQLPESEADQAKLLLELQKENRELRVQLARQQQKVLTLQAQSLAANCSPTPSSVTSLLSPPSSIQPNEKRKPRSSFLAGNCFTPESKRKGAEETVRELQRTVKALEAEMERMKKDHVFQLKQKDDFIRDLSRKSGKPSEGVVVGQGVKRVVTRASLRPKEPTGGELKSPSHRFLSPAPTAKKRSFWDITTANSPSVATLNGRKTRSHVISEPAAAPSMLLQLAYPCFWFVFMFGPHMINCINQPGFHSSKANALKR* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0410 783 MobiDBLite consensus disorder prediction 1 42 - -
Vvi17g0410 783 Coils Coil 615 649 - -
Vvi17g0410 783 MobiDBLite consensus disorder prediction 576 597 - -
Vvi17g0410 783 Pfam Kinesin motor domain 192 516 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi17g0410 783 PRINTS Kinesin heavy chain signature 466 487 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi17g0410 783 PRINTS Kinesin heavy chain signature 269 290 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi17g0410 783 PRINTS Kinesin heavy chain signature 383 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi17g0410 783 PRINTS Kinesin heavy chain signature 417 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi17g0410 783 MobiDBLite consensus disorder prediction 576 620 - -
Vvi17g0410 783 Coils Coil 541 568 - -
Vvi17g0410 783 ProSitePatterns Kinesin motor domain signature. 416 427 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi17g0410 783 ProSiteProfiles Kinesin motor domain profile. 186 516 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi17g0410 783 MobiDBLite consensus disorder prediction 682 705 - -
Vvi17g0410 783 MobiDBLite consensus disorder prediction 59 78 - -
Vvi17g0410 783 FunFam Kinesin-like protein 181 521 - -
Vvi17g0410 783 PANTHER CENTROMERE PROTEIN E 185 642 IPR027640 GO:0003777|GO:0007018
Vvi17g0410 783 SMART kinesin_4 184 524 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi17g0410 783 MobiDBLite consensus disorder prediction 13 42 - -
Vvi17g0410 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 561 IPR027417 -
Vvi17g0410 783 Gene3D Kinesin motor domain 183 522 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0410 Vvi-Chr17 4545380 4549235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0410 178 563 Miscellaneous Gene Families AT2G21380 37.789 3.86e-58 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0410 K10401 - vvi:100259414 1459.51