Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0399 ATGAACTTAGAGATTGATGACTCAAGCTTCCAACAAGAAGAGATTGAAGAAGACGGGGAAGAGAAGTCTGCGGATTCTGAATTTTCAGCTGAGGAAGAGGAAGAGATTAAAGGGAGTACTACCAGAAGAAAAATGGAACAAAATTTGAATTTACCCAAAAGAAGAGAGAGTGGAAATCCACAAGATGTTACAGGTGAAATAGAGATACTACAGAACGCAGTAAAGGAAATGGAGAGAAAAAGAAGGACCCTTGAAGGGAAACTGCTAGAAATGTATGGTATTAAAGAGCAGCGTTCATATATTGCTCAGTTGCAGAAGCACTTGAAGGTCAAGACGGAGGAGGTCGACTTTCTGAGCATCACCGTGAACTCGTTGCGGGCAGAGACGAAGAAACTTCAAGAGGAAGTCAAAGAGGGTGTGTTGGTACAGAAGCAGCTAGAGATTGCAAAGAAGAGAATAAAAGAACTGCACAAGAAGATGACTACAGATAGGAACTGGGCGAGGAAGAAATTGCTAACGCTAGCACGAGAAGTTTCCGGTTTTGAGAAGACAGGAATATCCAGTACAGATCATGAGAATGTTGAAAAGAAGACCGGAAGTGTGGAATTCAAAGCTATGGAGATGAAGAGGAGGAACAAAGAGCTTGAAATGGAAACGGGAGGACTGAAAATTATGTTGGTTGCTGCAGAAGACAAAGCAAATGCGCAATCCAATATGACAGAGGATAAGCTGGAGGAGGAGATGAATAAGTTTAGGCATGCAAACGAAAGTTTATCCAAACAGATAGAAAAATTGCGGAAAAACAGGTTCGGCATAATCGAAGAGCTAATGTACCAACGCTCGCTCAACGCTTGCTTGAGGTTCGAAAGCCAAAATTTCCTAACCCCACCGATTCTCAGCAAGAATTCAAGCCAAGAATCTCATGGCAACAAGACTCCTACTCCAATCCCACACCATAATTCTTACAGCAAATCTTCTTCCTCATCCTCGATTGACAAAACTACAATAGACAGCTCTTCTAGCAGCGAGAGGAGCATAAGCAAGAAATATGGTTTGATTCATAATATAAGAAGATGGGGAAGACGAAAGGATAATCCAAGATTAGTTGTTTCATCATCGGAGAGGTCTTCTAGAGAAAATTCTCCATTCAAGGCAGGCGGCCTAATTCGCAGGTTATCTATGTCAGATGTTCCACTGCAAAGGAAGGAAAATGACAGCACCGGACTAGTAGGCATCACCCCATCTAGGAAGATCAAAAGAGTGCAGTTTAGCATCCAATCTCAGGAAGTTCAAAGCGTCTTTGATCTCGAAAGGAATCCAATCGACACAGTAGCATGGCTGAGACCAACTGGAGACCTGGATGACAAGAAAAATTCAGCCATGCAATCAAGCAGAGCTGGGTCCCTTATGGGGGGAGACGAGAAACATGAAGTGAGTCTGAAAAAGGCCAGTCATTGCAGGGATTTGAGTGGGACAGACATGGGCAATGGTAAGGTTGAAAGTGGGGACAAAGAGGAGTTGCATCATTCAAATATGCTGCCCAATGTTCTTCATAGTGACAGCAGGGTTTGGACCCCTCTGCGTTCTTCCTCTTTCTCTTGA 1602 0.4326 MNLEIDDSSFQQEEIEEDGEEKSADSEFSAEEEEEIKGSTTRRKMEQNLNLPKRRESGNPQDVTGEIEILQNAVKEMERKRRTLEGKLLEMYGIKEQRSYIAQLQKHLKVKTEEVDFLSITVNSLRAETKKLQEEVKEGVLVQKQLEIAKKRIKELHKKMTTDRNWARKKLLTLAREVSGFEKTGISSTDHENVEKKTGSVEFKAMEMKRRNKELEMETGGLKIMLVAAEDKANAQSNMTEDKLEEEMNKFRHANESLSKQIEKLRKNRFGIIEELMYQRSLNACLRFESQNFLTPPILSKNSSQESHGNKTPTPIPHHNSYSKSSSSSSIDKTTIDSSSSSERSISKKYGLIHNIRRWGRRKDNPRLVVSSSERSSRENSPFKAGGLIRRLSMSDVPLQRKENDSTGLVGITPSRKIKRVQFSIQSQEVQSVFDLERNPIDTVAWLRPTGDLDDKKNSAMQSSRAGSLMGGDEKHEVSLKKASHCRDLSGTDMGNGKVESGDKEELHHSNMLPNVLHSDSRVWTPLRSSSFS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0399 533 MobiDBLite consensus disorder prediction 514 533 - -
Vvi17g0399 533 Coils Coil 241 268 - -
Vvi17g0399 533 Coils Coil 115 135 - -
Vvi17g0399 533 MobiDBLite consensus disorder prediction 1 63 - -
Vvi17g0399 533 MobiDBLite consensus disorder prediction 470 488 - -
Vvi17g0399 533 MobiDBLite consensus disorder prediction 297 344 - -
Vvi17g0399 533 Coils Coil 67 90 - -
Vvi17g0399 533 MobiDBLite consensus disorder prediction 33 51 - -
Vvi17g0399 533 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 29 365 IPR040265 -
Vvi17g0399 533 MobiDBLite consensus disorder prediction 451 533 - -
Vvi17g0399 533 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0399 Vvi-Chr17 4477986 4479788 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0399 - - vvi:104882335 954.51