Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0385 ATGGCTGTGTCTTCCACAAAGCCAAATTCCCAGGCCAACATCCAAGACACTCAACCACTCCCCAAGAAGCAGCGGACCAAATCACCTGGAGTTCGAATCATTGGAGGCCGTATCTATGATTCTCAAAATGGCAAGACTTGTCACCAGTGTCGCCAAAAGACCATGGATTTTATGGCACCATGCAAGAACCAGGGGGAGAAGAAGCAATGTAGCTTTCGTTTTTGTCATAAATGCCTCTTGAACAGATATGGAGAGAAAGCGGAGGAGGCGGTAGCGTTGGATGAATGGAAATGTCCCAAGTGCAGAGGTATTTGCAATTGCAGCTTCTGCATGAAGAAGCGAGGCCATCGGCCAACTGGGATTCTTGTCCACACTGCAAAGGCAACTGGGTTTTCTTCAGTCTCTGAAATGCTGCAGTTTAAGGGCTCTGAAAATTCAGGTTCTGAGAGGTCTGTGCCAGATGAAGGCACCTCATTGACAGCTTCAAGTGAGGAGCTTGTGGTGGCCTTATCAGGAAGCAGAGAGAAAAATGGTTCTGATGGAAGAGATGATTCGAGAGTGCAGTCAATGCCTTTGCAAATGAATGGCAGTGCAAAAGAAACTAGAAATAGCAAGTCGAAATCAATAAGAAAAAAAGCTGACAATAGTATGTGTGAGCATAATGGGGATGATGGTGCATCTACAGGGAAAAGTTGTCCTAAGAAACCTCGGATTTCCAAGGAAGTATCTAAGAAAGAAGGAAAGATCCACAAAAGGGTCCAATTTAATAAATCGAATGCTGATATGCGTTTTCCCGACAAAACTTCTGCAGAGTCTATTGAAATAGAAGATAATGAGGCTACAGCACCTAGTTATGCAAATATTGATGGCCACAAAACCAAGCATAAGCCAGTGAAAAAATCATACGGGTGTAAAAGGAATACACTGGAAGTCCAAGGCAAAGATTCTCATGTTGAAATCCTGCTGCCTCAGGGCACTCAACTGAGCAGTGTGGCTTCCATTGACATGTTGGCTGAGGATGTTGGGCATGCCTTGCAATTCTTGGAATTTTGTGAAGCTTTTGGACAGGTTCTTGATCTAAAGAAAGGACAGCCTGAGTTGTTACTCAGAGAATTGGTATGTGGACAAAATAAACTTCAAAGGCTGGCCCCTTCGGTTGTCCGGTTCCATGTCCAACTGCTCTCAATGATACAGAAGAACTCAGAGAACAATTATCCTTCCTTATATCCCACAAGACGGGGAAATTCATGGTTGAAAGCTCTAAGTAGATGCATCTCTGAATCCCGGTTTCCACCAAGGGAACTTCAGTTGGATTGTGTTGACATGGATGGAGATGGATACAATAAGTTAAACTCCTCCAAAAAGCTCAGACTCTTGAATTTTCTATGTGATGAAGCTCTTGGCACAGTAGAATTAAGGAATTGGATTGATGTACAAAGCTCAAATTTTATTGAAAGAGAGAAGAAAGAAAAAGGAAAGTGCTCTGCATTGGAGAAAAACATGAAGAAGCGGCTGCAGGATGAGATGGCCAAAGCTCTTCTCATGAAAAATGGTGCTCCTCTTTCCATTTCTGAATATGATGATCTTGTTTCAAAAATAAAAACGGAAGTAGCCCAGACTTTTGCAGAAACTGTAGAAGCAACAGATCCCAAGAAGAAACAACGCTCTGATGCTGTTAGATCAGAGCCGATATTTGTGGATGGGAACGGTCGCAAGTTCTGGAGATCGAGTTGCTGCTCTAGTGATGTGGATATTCTGCTTCAAGATGTTGGAAACAGTGATCCAGCTACATACGAAGAAAAATGGTTTACCTATCATGTTGAACAGAAGGCAACAGTTGAGAGCTATATTTCATCTTTAAGGAAGCTAAGAAAATGA 1878 0.4271 MAVSSTKPNSQANIQDTQPLPKKQRTKSPGVRIIGGRIYDSQNGKTCHQCRQKTMDFMAPCKNQGEKKQCSFRFCHKCLLNRYGEKAEEAVALDEWKCPKCRGICNCSFCMKKRGHRPTGILVHTAKATGFSSVSEMLQFKGSENSGSERSVPDEGTSLTASSEELVVALSGSREKNGSDGRDDSRVQSMPLQMNGSAKETRNSKSKSIRKKADNSMCEHNGDDGASTGKSCPKKPRISKEVSKKEGKIHKRVQFNKSNADMRFPDKTSAESIEIEDNEATAPSYANIDGHKTKHKPVKKSYGCKRNTLEVQGKDSHVEILLPQGTQLSSVASIDMLAEDVGHALQFLEFCEAFGQVLDLKKGQPELLLRELVCGQNKLQRLAPSVVRFHVQLLSMIQKNSENNYPSLYPTRRGNSWLKALSRCISESRFPPRELQLDCVDMDGDGYNKLNSSKKLRLLNFLCDEALGTVELRNWIDVQSSNFIEREKKEKGKCSALEKNMKKRLQDEMAKALLMKNGAPLSISEYDDLVSKIKTEVAQTFAETVEATDPKKKQRSDAVRSEPIFVDGNGRKFWRSSCCSSDVDILLQDVGNSDPATYEEKWFTYHVEQKATVESYISSLRKLRK* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0385 625 ProSiteProfiles DDT domain profile. 338 403 IPR018501 -
Vvi17g0385 625 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 39 138 IPR018866 -
Vvi17g0385 625 MobiDBLite consensus disorder prediction 140 246 - -
Vvi17g0385 625 PANTHER OS05G0300700 PROTEIN 6 560 IPR040221 GO:0006355
Vvi17g0385 625 SMART testlast3 338 403 IPR018501 -
Vvi17g0385 625 MobiDBLite consensus disorder prediction 140 167 - -
Vvi17g0385 625 MobiDBLite consensus disorder prediction 203 219 - -
Vvi17g0385 625 MobiDBLite consensus disorder prediction 1 30 - -
Vvi17g0385 625 MobiDBLite consensus disorder prediction 184 202 - -
Vvi17g0385 625 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0385 Vvi-Chr17 4155405 4159737 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0385 - - vvi:100242396 1253.81