Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0382 ATGGGTACATTCTTACAGTGGCTGTCTGCAATATCCTTCAGTGGGGATGGTTATGATGACCTTGCAATTGCAGAAGGACTAGCTGATGCCTTGTTGATGTTTCCAAGGCATCCACATGGAACCCAAACTCAACAACGTTTACTTGGACGGAGGCATTGCATTCTTGTAGCTGCTAGTAACCCCTTCCCTTTCCCCATTCCTGTCCACCTCCCCAAAATCCAAAATTTGCAAGGCGCTCAAATTTCTGGTGCAACCACTGAATTTTCTCTCGCTGATCCCAACATGGTTGCTAAGTTATTCACTCAGTTTCTTATTCTAATCTCCAAGAATTTCCCAGAGGCTCATGCTGCTCTAAATGAGTACAATGTAACAAGCACACCATCGATTCAAAACCCAGTCTAG 402 0.4453 MGTFLQWLSAISFSGDGYDDLAIAEGLADALLMFPRHPHGTQTQQRLLGRRHCILVAASNPFPFPIPVHLPKIQNLQGAQISGATTEFSLADPNMVAKLFTQFLILISKNFPEAHAALNEYNVTSTPSIQNPV* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0382 133 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25 1 102 IPR045105 -
Vvi17g0382 133 Pfam Mediator complex subunit 25 von Willebrand factor type A 3 81 IPR021419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0382 Vvi-Chr17 4142905 4144453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0382 K15168 - vvi:104882338 251.521