Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0381 ATGCAGCGATTCGTCGACTCGTCCCTCGCAGTCGTCAAGGAGTCCGTGAAGACTATCACTTATGAGTCTTTGAACAATATTGCAAGGCTGATAAATGGAATGTCAGCACTTCTATTGGCCATTCTGCCTGGGAAGGCCAATATTCTTGAAGGTATTCATGGCTGGGAGCTCAGGCCAACTTTCCGTGGACCTCGTCTTCCACGCTGGATGGGGAATGGCGTCTCCTCTTTCAACCAGTTTATCCATGAACTTTCTGTGGATTCTGATACTTCATCAAGTGCTGATCACTCGTCTGGAGAAGAAGATAATGATGGCGCATATCCTCCATCACCTTTATCTCAAAGTTCTCGCCTCTCCAGGGCAAGCAGTTATACAAAGGATGATAAGATTTGGACATGCTGGATTATATGGATATTTTCGTGGATTCTGTTTCCTGTAAAGTTTCTGCTGGGGATACCATTTTGTCTTTATCATTTGTCTTTTTCTAGGGGGTCAAAATCCCCATCCACCTCAAGAAGCCACCAGCCTTCACCTGCACGTCCTCTTAAGAGAGTATACACCCTCAAGGATCATCCTTTTCATCTCACCACTGACAGGAGACGTGGAGTAATTGAGGATCTTCATCTAGCAATTGAGATATTCATAGAGGCGATATTTGATGTTGTTCACAAGGCAGCACATTGTGTTCTTTCACCATCTGAAGCTTTCAGAATAATGTTTAGATGGGTTTCTTCCCACAGTAGTAATACTGATACTTCTGCTGGTGGTTTGGATGCCTCTGTCCCTACGGCTACACTTGGAGAGGATGATCCAACTGTTAGAGAAAGGAAAACTACTTTTAATAACACTCTAAATACAGATGCCCGGACATGTCAGGATGTCATAACAGAGTTTGGGTACCCTTACGAAGCTATCCGTGTGGTCACTGCTGATGGTTATGTGCTTCTTTTGGAAAGAATTCCCAGACGTGATTCACGGAAGGCCGTTTATCTACAGCATGGAATATTGGATTCCTCTATGGGGTGGGTGTCTAATGGAGTTGTTGGTTCTCCAGCTTTTGCAGCCTTTGATCAAGGGTATGATGTTTTCCTTGGGAACTTCCGTGGCTTGGTTTCTAGGGAACATGTCGACAAGAAAATTTCTTCAAGAGAGTACTGGCGATACTCCATCAATGAACATGGGACTGAGGACATACCTGCAATGATAGAGATGATTCATCAAATAAAGACTTCAGAGTTGAAGGGTAGCAAACCTGATCTTAAGGAAGAAACTGATGATGATCAGCCTTACAAACTTTGTGCAGTGTGCCACAGCTTGGGAGGAGCGGCTATTTTAATGTATGTCATAACACGTCGGATTGAGGAGAAGCCCCACAGACTTTCAAGATTGATCTTGTTATCACCTGCTGGCTTCCATGAAGATTCCAACCTAGTGTTTACAGTGGCAGAGTATATTTTCCTTTTATTTGCCCCTATCCTGGCACCCCTTGTGCCTGGCTTCTATATACCTACAAGATTCTTTCGTATGCTGTTGAACAAATTGGCTCGAGACTTCCATAACTACCCTGCAGTTGGAGGACTGGTTCAAACCCTGATGAGTTATGGCGTTGGTGGAGACAGCTCAAACTGGGTAGGAGTGTTAGGTATACCACATTACAACATGAATGACATGCCAGGAGTTTCATTCCACGTGGCTCTCCACCTCGCACAGATGAAGCATGCCAGAAAATTTATAATGTATGATTATGGCAGTTCATCTGCCAACATGAAAATGTATGGATCATCTCAGCCATTTGACTTGGGTGAATACTATGGGCTCATTGATATTCCTGTTGATCTTCTTGCTGGACGGAAGGACAACGTGATCCGGCCATCAATGGTGAAAAAGCACTATTCGTTGATGTATAAGTCTGGTGTAGATGTATCATACAATGAGTTTGAGTATGCTCACTTGGATTTCACATTCTCACACCATGAAGAACTCTTGGCCTTCATCATGTCACGCTTACTGCTGGAGAGGCCCTCCCCAAAGCATCAATCTGGTCAGAAGGCTGCTATCTCAAAGAAAAAAAGCTGA 2076 0.4403 MQRFVDSSLAVVKESVKTITYESLNNIARLINGMSALLLAILPGKANILEGIHGWELRPTFRGPRLPRWMGNGVSSFNQFIHELSVDSDTSSSADHSSGEEDNDGAYPPSPLSQSSRLSRASSYTKDDKIWTCWIIWIFSWILFPVKFLLGIPFCLYHLSFSRGSKSPSTSRSHQPSPARPLKRVYTLKDHPFHLTTDRRRGVIEDLHLAIEIFIEAIFDVVHKAAHCVLSPSEAFRIMFRWVSSHSSNTDTSAGGLDASVPTATLGEDDPTVRERKTTFNNTLNTDARTCQDVITEFGYPYEAIRVVTADGYVLLLERIPRRDSRKAVYLQHGILDSSMGWVSNGVVGSPAFAAFDQGYDVFLGNFRGLVSREHVDKKISSREYWRYSINEHGTEDIPAMIEMIHQIKTSELKGSKPDLKEETDDDQPYKLCAVCHSLGGAAILMYVITRRIEEKPHRLSRLILLSPAGFHEDSNLVFTVAEYIFLLFAPILAPLVPGFYIPTRFFRMLLNKLARDFHNYPAVGGLVQTLMSYGVGGDSSNWVGVLGIPHYNMNDMPGVSFHVALHLAQMKHARKFIMYDYGSSSANMKMYGSSQPFDLGEYYGLIDIPVDLLAGRKDNVIRPSMVKKHYSLMYKSGVDVSYNEFEYAHLDFTFSHHEELLAFIMSRLLLERPSPKHQSGQKAAISKKKS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0381 691 Pfam Partial alpha/beta-hydrolase lipase region 292 346 IPR006693 GO:0006629
Vvi17g0381 691 PANTHER LYSOSOMAL ACID LIPASE-RELATED 223 660 - -
Vvi17g0381 691 SUPERFAMILY alpha/beta-Hydrolases 289 667 IPR029058 -
Vvi17g0381 691 Gene3D alpha/beta hydrolase 279 669 IPR029058 -
Vvi17g0381 691 FunFam Gastric triacylglycerol lipase 280 670 - -
Vvi17g0381 691 MobiDBLite consensus disorder prediction 88 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0381 Vvi-Chr17 4126875 4141869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0381 1 675 Lipid Metabolism Gene Families AT1G18460 69.219 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0381 - - vvi:100252671 1363.21