Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0373 ATGGAGGCTCCGCAAGGTGGATCCGACCGAGACAAGCCTATGCCCGCATCTTCTTCTCCTATCCCCGTCGTCTCTAATTTCTGGAGAGAATTTGATTTAGAGAAGGAAAGGAGTGTGTTGGATGAACAAGGGCTTAGAATAGCTGAAAATCAGGAAAACAGCCAGAAAAATCGGCGGAAGCTTGCAGAGAGCACTCGAGATTTCAAGAAAGCTTCACCAGATGAGAAGTTAAATTTGTTTAATTCTTTACTAAAGGGTTATCAAGAAGAAGTTGATAATCTTACTAAGAGAGCAAAATTTGGAGAAAATGCTTTTCTTAACATCTACCAGAAACTTTATGAGGCTCCAGATCCTTATCCAGCTCTTGCTTCAATTGCTGAGCAAGATATGAAATTGTCTGAGCTAGAGTCTGAGAACCGGAAGATGAAAGTGGAACTTGAGGAGTTCAGGACAGAGGCAACTCATCTAAAGAATCAACAGGCAACAATAAGAAGACTTGAAGAGCGTAATCGCCAGTTAGAACAACAGATGGAGGAGAAGGTGAAGGAAATTGTGGAAATGAAGCAACGCAGTTTGGCAGAAGAGAACCAGAAGACACTAGAGGTTTTAAAAGAGAGGGAGCGATTATTGCAGGATCAATTACGACAAGCTAAAGAAAGTGTTTCTAATATGCAGAAACTACATGAACTTGCACAAAGCCAGATGTTTGAACTTCGTGCCCAATCAGAGGAAGATACAGCAGCAAAACAATCAGAAGTCAGCCTTCTAATGGATGAAGTTGAACGGGCTCAAACACTGCTTCTTAGCCTTGAGAGGGAGAAGGGACTTCTACGCTCCAAGTTACAGTCAGCAAACGATGAGAATGGACAAAAGAAGAGTGATAATCTAGATTCAAATAGTATACTTGAAAATTCTTTGAGTGCCAAAGAAAAGATTATCTCTGAGCTGAACATGGAACTTCACAACATCGAGATCACCTTATCCAATGAGCGAGAACAACACGTGAATGAGATCAAGAGGTTGAATGCATTGCTAAATGAAAAGGACCTTGCTCTGGAGGAGATCAAGAAGGAGCTTCTGGCAAGGCCAACAGCAAAATTAGTTGATGATTTACGTAAAAAAGTGAAAATTCTGCAGGCAGTTGGTTATAATTCAATTGAGGCAGAAGATTGGGAAGTTGCTACTAGTGGTGAGGAGATGAGTAAACTGGAGTCCCTTCTTCTTGATAAGAATCGGAAAATGGAACATGAACTCACACAGTTAAAGGTCAAACTTACGGAGAAAACATCTTTACTGGAAACAGCTGAAGGCAAAATAGTAGAACTTACAGCCAAGGTCAATGAACAACAAAGATTGATACAAAAGTTGGAAGATGATATATTGAAGGGTTATAGTTCGAAAGAAAGAAAAGGTAGTTTATTTGAAGATTGGGATCTATTGGATAATGGGGCAACAGAGACATCTCAGCGTGCAGAACAAAAACATGTTTCTCCAGATCAGGAACAAAACTCAATGCTTAAGGTGATCTGCAATCAGCGAGATCGGTTTAGAGCACGGTTGCGAGAGACAGAAGAGGAAGTAAAACAGTTGAAAGAGAAGATAGGGCTGCTAACAGTGGAACTGGAAAAAACGAAAGCTGACAATGTCAAACTCTATGGGAAGATTCGTTATGTCCAGGATTATAATCTTGAGAAAGTAGTTTCTAGAGGATCAAAGAAGCATTCAGAAGATCTTGAGAGTGGTTTCAGCTCAGATGTTGAATCCAAGTACAAGAAGATATATGAGGATGATATAAATCCCTTTGCTGCTTTCTCCAAAAAGGAAAGGGATCAAAGGTACAAGGAGTTGGGTATCAGGGATAAAATTACACTTAGCAGTGGGCGATTTCTTCTTGGCAACAGATATGCCCGGACATTCGCTTTCTTCTATACCATTGGGTTACATGTCCTGGTGTTCACCTGCCTATACAGAATGTCAGCTCTGAGCCATCTTAGCAATGGCCCCGAGGAATCCCTTATTGGACAGAAAATCATCAACCTCCCTCACGCACCTTGA 2055 0.4097 MEAPQGGSDRDKPMPASSSPIPVVSNFWREFDLEKERSVLDEQGLRIAENQENSQKNRRKLAESTRDFKKASPDEKLNLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALASIAEQDMKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERNRQLEQQMEEKVKEIVEMKQRSLAEENQKTLEVLKERERLLQDQLRQAKESVSNMQKLHELAQSQMFELRAQSEEDTAAKQSEVSLLMDEVERAQTLLLSLEREKGLLRSKLQSANDENGQKKSDNLDSNSILENSLSAKEKIISELNMELHNIEITLSNEREQHVNEIKRLNALLNEKDLALEEIKKELLARPTAKLVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKLESLLLDKNRKMEHELTQLKVKLTEKTSLLETAEGKIVELTAKVNEQQRLIQKLEDDILKGYSSKERKGSLFEDWDLLDNGATETSQRAEQKHVSPDQEQNSMLKVICNQRDRFRARLRETEEEVKQLKEKIGLLTVELEKTKADNVKLYGKIRYVQDYNLEKVVSRGSKKHSEDLESGFSSDVESKYKKIYEDDINPFAAFSKKERDQRYKELGIRDKITLSSGRFLLGNRYARTFAFFYTIGLHVLVFTCLYRMSALSHLSNGPEESLIGQKIINLPHAP* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0373 684 Coils Coil 253 287 - -
Vvi17g0373 684 Coils Coil 338 358 - -
Vvi17g0373 684 MobiDBLite consensus disorder prediction 46 68 - -
Vvi17g0373 684 MobiDBLite consensus disorder prediction 1 22 - -
Vvi17g0373 684 Coils Coil 193 234 - -
Vvi17g0373 684 Coils Coil 125 190 - -
Vvi17g0373 684 Pfam CASP C terminal 434 661 IPR012955 GO:0000139|GO:0006891
Vvi17g0373 684 Coils Coil 432 459 - -
Vvi17g0373 684 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 15 616 - -
Vvi17g0373 684 Coils Coil 313 333 - -
Vvi17g0373 684 MobiDBLite consensus disorder prediction 52 68 - -
Vvi17g0373 684 Coils Coil 506 547 - -
Vvi17g0373 684 Coils Coil 77 104 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0373 K09313 - vvi:100259260 1277.31