Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0372 ATGGGTCGCATCCAAGATCAATCGCAGAACCAAGCTGAGTACGAGCTACAGCCTCAAGAATATCAATCCGAATCAACACAGGACTTGACACTCGCTCTGGATCATGATCAACTCCAGCAAGAGGAGTATCCACAAGGGCCAAAACACCCATCCGACGCCATGGAAAGCGAGCCACAAGCTCAGCAACAGTTCCAGCAACCACCACAATACGGTAACCCACAAGCACAGCCCAACCCTGCTTACATGCCTCAACAGACTCAGCAAGTCTCGCGTCCGCAGAACCCGCAAATGAATGCGATGAACGCCAACCAGCTTGCTCCGTTCCCCCCACAGAGCCCACAATCATTGCCTCTGCAGCAGTCGCCGCAACTCCATGTGTTTCCTCATGGTCCATTCCAACCGCAGGGCTTCGGTACTGGTATGCATGGTTACCAATCTCCATCACCGGTGCCATTTCCGCCGGCGAGTGGTGAATATCAGGGTGTTCTGGCTTCTCCCCACAAACCTCCGGCTGCTGCTGAGTATTGGACAAGTGGGCTGTTTGATTGCATGAATGATCCTACCAATGCACTAGTCACAGTTTTCTTCCCATGCGTGACATTCGGGCAAGTCGCGGAGATTGTGGACCGTGGTCACACTTCATGCGGGACCAGCGGACTACTCTATGGATTGATAGCCTTCCTCATCGGATTGCCATGCATAATGTCATGCACGTACCGCACAAAGATGAGGAGCATGTACAACCTCTCCGAATCTCCAGGACCTGATTGGGTTGTTCATTGTCTCTGTGAGTGTTGTGCTCTTTGCCAGGAATACAGAGAACTTCAAGCAAGAGGCTTCGACCCTTCAATTGGATGGATTGGAAATGTAGCCAAAAGTCAGAACATCCAGATGCAGCATGGTGCCATGGTGCCACCAGGGAGCCAAACTATGATGGGTTAA 942 0.518 MGRIQDQSQNQAEYELQPQEYQSESTQDLTLALDHDQLQQEEYPQGPKHPSDAMESEPQAQQQFQQPPQYGNPQAQPNPAYMPQQTQQVSRPQNPQMNAMNANQLAPFPPQSPQSLPLQQSPQLHVFPHGPFQPQGFGTGMHGYQSPSPVPFPPASGEYQGVLASPHKPPAAAEYWTSGLFDCMNDPTNALVTVFFPCVTFGQVAEIVDRGHTSCGTSGLLYGLIAFLIGLPCIMSCTYRTKMRSMYNLSESPGPDWVVHCLCECCALCQEYRELQARGFDPSIGWIGNVAKSQNIQMQHGAMVPPGSQTMMG* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0372 313 MobiDBLite consensus disorder prediction 1 34 - -
Vvi17g0372 313 Pfam PLAC8 family 176 274 IPR006461 -
Vvi17g0372 313 MobiDBLite consensus disorder prediction 1 119 - -
Vvi17g0372 313 NCBIfam uncharacterized Cys-rich domain 175 276 IPR006461 -
Vvi17g0372 313 PANTHER DUF614 FAMILY PROTEIN-RELATED 170 284 IPR006461 -
Vvi17g0372 313 MobiDBLite consensus disorder prediction 55 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0372 Vvi-Chr17 3953006 3954367 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0372 - - vvi:100250709 618.616