Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0368 ATGCGGGTAAGAGGTGCGGGTGCTATAGGAAGAGACGACTCGGAGAATGATGGATTACTAGTAGGAGAAGAGGAAGTCATACCTAGTGTAGGAGATGAAGTCAAGGTTTCCATAGCATCAGGCGCTATAGAGGATAACGGCTCTCACTCTTCATTAGGTGATTCAGTGCTGGACACTGTGGGTACAGAGATTGAAAAGACAGAGAATGAAACTCCAAAGGAGAAAGCTGGAGCTTCGGAGGACCCTGAGTCCAAGAAAGTGGAAATGAATGATTGGCTCTTTGGGTTTACGCAACTGTTCAGAACCCATGTTGGTATTGATCCAGATGCTCACTTTGACCTACATGAGCTTGGGATGGAGCTCTGTTCTGAAGCTCTTGAGGATACAGTGACAAGTGAAGAGGCTCAAAGCCTGTTTGACAAGGCTGCTCCAAAATTCCAGGAGGTAGTTGCATTGGCTTTCTTCAATTGGGGGAATGTTCATATGTGTGCAGCAAGGAAACGCATTCCTTTGGATGAATCTGCTGCAAAAGATGTGATGGCAACCCAACTTCAAGTGGCTTATGACTGGGTCAGAGAAAAATGTTCTTTTGCCAAAGAGTAG 603 0.4577 MRVRGAGAIGRDDSENDGLLVGEEEVIPSVGDEVKVSIASGAIEDNGSHSSLGDSVLDTVGTEIEKTENETPKEKAGASEDPESKKVEMNDWLFGFTQLFRTHVGIDPDAHFDLHELGMELCSEALEDTVTSEEAQSLFDKAAPKFQEVVALAFFNWGNVHMCAARKRIPLDESAAKDVMATQLQVAYDWVREKCSFAKE* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0368 200 PANTHER PROTEIN CLMP1 65 199 IPR044517 -
Vvi17g0368 200 MobiDBLite consensus disorder prediction 1 26 - -
Vvi17g0368 200 MobiDBLite consensus disorder prediction 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0368 Vvi-Chr17 3837403 3839267 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0368 - - vri:117923449 291.582