Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0361 ATGACCGCGAAACTTGGGTCGTTCAGACACACTTTTGCAGAGAAGAGGGAGAGAGACAGATTGTTATCATGCAAGGGGTATTCAGAGCTAGGGTTCGTCCATTTAGAAGAAAATGAAGAAGCAACACCCAGGTGGTGTTCTTTCCGATCGATTCGCCACAAATTTGCGAATTGGTGGAAGACCACGAAAGATGTTGCCGCCAAAGGATGGGAAATGGGTCTGTCCGATCCTCGGAAAATTGTCTTTTCTGCGAAAATGGGTCTGGCTTTGATGCTTATAACGTTGTTGATTTTCTTGAAAGAGCCCGTGAAGGATCTGGGTCGGTACTCTGTTTGGGCCATTCTTACTGTTGTGGTTGTCTTTGAATTCAGTATAGGAGCGACCCTAAGCAAAGGATTTAACCGTGGGTTGGGAACGTTCTCTGCAGGAGGCCTTGCTCTAGCCATGGCTGAGTTGTCTACATTGGCTGGAAAATGGGAAGAAGTTGTCATTATTATCAGTATTTTTATCATAGGATTTTGTGCAACTTATGCAAAGCTGTACCCAACAATGAAGGCATATGAATATGGGTTCCGAGTTTTCACGTTGACATATTGTTTCATAATGGTATCTGGGTATAGGACAAGAGAATTTATCGAAACAGCCATTACTCGATTCTTGCTCATTGCCTTGGGTGCTGGGGTATGTTTGCTTGTAAATATATGCATCTATCCCATCTGGGCTGGTGAGGATCTGCACAACTTGGTAGCGAAGAATTTCATGGGTGTTGCTAATTCCCTGGAAGGTTGTGTCAATGGGTACCTCAATTGTGTTGAATATGAGAGGGTTCCTTCCAAGATCCTTACTTACCAAGCTTCAGACGATCCACTTTATGCGGGGTATAGATCAGCTGTTGAATCTACAAGTACAGAGGAAGCTTTGGTGAGCTTTGCCATCTGGGAGCCACCTCATGGTCCTTACAAAATGCTTAAATATCCTTGGAAGAATTACATCAAACTAAGCGGGGCACTGAGGCATTGTGCATTCATGGTTATGGCATTGCATGGATGCATACTTTCAGAAATACAGGCATCAGCTGAACGAAGGCAGGTCTTTAGGAATGAGCTTCAGAGGTTAGGTAATGAAGGTGCTAAAGTGTTACGGGAGCTAGGAAGCAAAGTTAAAAGGTTGGAGAAATTAGGACCAGTGGACATTCTCTATGAAGTTCATGAGGCAGCAGAAGCATTGCAGAAGAAGGTAGACCAGAAATCATATCTTCTTGTCAATTCAGAAAACTGGGAAATTGGAAAACGGCCAAAGGAGGTGATAGATCAGCAAGAGATTCTCAACATGGAAAATGAAGAAAACAAATTTCTTGAATTCAAGTCCCTCAGTGAAGCTGTGCTTGATCTCAGATCACTTCCAGGGGCACGAGGTTGGGATTTCCAGATCCCTGACATGGGTGGCTACTCACCACTGCCTGATGGTGCTCCCCCAGAGAAGCCAGCCAATTCACAGGTTCCCCGGTCTTCCTTTTTATCATCTGATGCTAAGGCTGAGCCTAAGGAAGAAGAATCAAAAACATATGAAAATGCTAGTGCATTGTCTTTAGCAACGTTTACGTCACTTTTGATTGAATTTGTTGCGAGGCTTCAAAATATTGTTGATTCATTTGAAGAATTAAGTGAGAAAGCAAATTTTAAGGATCCTGCTGATCAAACAGCCGTGCCTGCAGCAGTGGAGTATGTTGGGTTTGGAACAAGATTGCGCAGGTGGCTGAAGTTGTAG 1767 0.4375 MTAKLGSFRHTFAEKRERDRLLSCKGYSELGFVHLEENEEATPRWCSFRSIRHKFANWWKTTKDVAAKGWEMGLSDPRKIVFSAKMGLALMLITLLIFLKEPVKDLGRYSVWAILTVVVVFEFSIGATLSKGFNRGLGTFSAGGLALAMAELSTLAGKWEEVVIIISIFIIGFCATYAKLYPTMKAYEYGFRVFTLTYCFIMVSGYRTREFIETAITRFLLIALGAGVCLLVNICIYPIWAGEDLHNLVAKNFMGVANSLEGCVNGYLNCVEYERVPSKILTYQASDDPLYAGYRSAVESTSTEEALVSFAIWEPPHGPYKMLKYPWKNYIKLSGALRHCAFMVMALHGCILSEIQASAERRQVFRNELQRLGNEGAKVLRELGSKVKRLEKLGPVDILYEVHEAAEALQKKVDQKSYLLVNSENWEIGKRPKEVIDQQEILNMENEENKFLEFKSLSEAVLDLRSLPGARGWDFQIPDMGGYSPLPDGAPPEKPANSQVPRSSFLSSDAKAEPKEEESKTYENASALSLATFTSLLIEFVARLQNIVDSFEELSEKANFKDPADQTAVPAAVEYVGFGTRLRRWLKL* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0361 588 MobiDBLite consensus disorder prediction 482 520 - -
Vvi17g0361 588 Coils Coil 355 375 - -
Vvi17g0361 588 Pfam Aluminium activated malate transporter 70 555 IPR020966 GO:0015743
Vvi17g0361 588 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 48 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0361 Vvi-Chr17 3767971 3772400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0361 1 584 Miscellaneous Gene Families AT3G18440 64.013 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0361 - - vvi:100250869 1155.97