Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0360 ATGACTCTGGTTTCTTGGGCTAAGAAGGGGCTCAACCGAATTGGTATCCGCCAATCCAGTAAGCTTCTACTCCCTCAGACCAGCCTAGCTTCAATTGAATCCTTAGAGACCCCTCTGGTCCAGGAGATAGTCTTAGCAGCTGATTTACATTGTCCCAATTGCCAAAAGAGGGTAGCCAATGTAATCTCAAACATTGATGATATGGAATCCTTGGTGGTCCATGTACAAGAGAAGAAGGTGTCACTGATTCGTCGCGCATCTGTCAGCTGTGAAGGAAAAGCTGCCAGGAAGTTCTACTGCATGGTCATGAGGATCAACATTGACTGCAATGGCTGTTACAGAAAAGTGAGGAGAGCCCTTCTGAATATACAGGAGTTGGAGACACATCTGATAGAGATGAAGCAGTGCAGAGTGACCGTGTGTGGTAGATTCATCCCACAGGACGTGGCAATCAAGCTGAGGAAGAAGACGAACCGCAGGGTAGAGATATTGGACATACAGGAGTTCAGTGTCAGCAGCGAAAATCAGGAGCAGAAACCCTTGATTAGTAGTACCAGCTGGAATCTGCTGTCCAGCCCAAGCCAGTTTGAAACCTGTACAACATGCATATAA 612 0.469 MTLVSWAKKGLNRIGIRQSSKLLLPQTSLASIESLETPLVQEIVLAADLHCPNCQKRVANVISNIDDMESLVVHVQEKKVSLIRRASVSCEGKAARKFYCMVMRINIDCNGCYRKVRRALLNIQELETHLIEMKQCRVTVCGRFIPQDVAIKLRKKTNRRVEILDIQEFSVSSENQEQKPLISSTSWNLLSSPSQFETCTTCI* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0360 203 Gene3D - 99 170 - -
Vvi17g0360 203 SUPERFAMILY HMA, heavy metal-associated domain 40 85 IPR036163 GO:0046872
Vvi17g0360 203 SUPERFAMILY HMA, heavy metal-associated domain 102 161 IPR036163 GO:0046872
Vvi17g0360 203 PANTHER OS08G0431150 PROTEIN 10 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0360 Vvi-Chr17 3763213 3764901 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0360 - - vri:117904778 390.193