Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0359 ATGGCTTCTCAGTCTCTTCCTCCCACTGCCATCACCTCTCTCGTCCTACTTCTCATCACCCTTATTCCTTCTGCTCTTTCTCAGAACCCCACCACCTCAGGCTCTACCATAGCGCAATGCAGCCTTCGCCTGCTACCTCTGGCTTCATGTGGATCCTATGTCCAGGGTTCAGCCCCAACACCAGTGCAGTCATGCTGTGACAACCTCAAGCAAGTCTATAGTCAGCAGCCCAATTGCCTTTGCCTCCTGCTCAACAGCACAGTCATGGGCTCTTTCCCCATTAACAGGACGCTGGCTCTGCAGCTGCCACTTGTTTGCAACCTTCAAGTCAGCATCTCTCCCTGTTCAGAAGGGATGACAGTGCCTCCTAGTTCACCCGATTCACAAGTTTCCCTTGGTGAAGGCACCAATTCCACTGTTGCCGCTTCTCCCGTGGTTGCAGTGGCACCAAGACCAAGCATTATGGGATTTGGGTTTGGCCGGAGTTCTAGCATGAGGTTGGAAGTGAAAGGTGACTTAGCTGTAGCAGTCATTTGGGTGGCCTGTTTGCTGACATAA 558 0.5233 MASQSLPPTAITSLVLLLITLIPSALSQNPTTSGSTIAQCSLRLLPLASCGSYVQGSAPTPVQSCCDNLKQVYSQQPNCLCLLLNSTVMGSFPINRTLALQLPLVCNLQVSISPCSEGMTVPPSSPDSQVSLGEGTNSTVAASPVVAVAPRPSIMGFGFGRSSSMRLEVKGDLAVAVIWVACLLT* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0359 185 CDD AAI_LTSS 47 108 - -
Vvi17g0359 185 Gene3D - 36 115 IPR036312 -
Vvi17g0359 185 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 18 138 IPR043325 -
Vvi17g0359 185 Pfam Probable lipid transfer 28 113 IPR016140 -
Vvi17g0359 185 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 39 114 IPR036312 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0359 38 170 Acyl Lipid Metabolism Gene Families AT1G73890 48.993 2.20e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0359 - - vvi:100268042 344.739