Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0347 ATGGATTCAGGAATTGAAGTTGTTGAAGAAAGATTGAACTCTTTCACTGGTCAGCTCCAATCTGAGTGTGCCATTCTTGAAAGAATTGTATACAAGAACAAGAATCAACACCGTAGATGCTCCTACTTTCAATACCTTCTAAAGGTGAGGAGGGACTTGAAACTCCTGCAATCAGCTAACTTGGAAGAGCTTTTGAGTTCATGCTTTCAAGTTATCCATGGAAAGAAACCCCAACAAAAGGTCCATCTTTTAGAAAGTTTAAAGAAGAGAAAAGGCGATGGTGGTAAATATAATTTTATGGAGCGGCTTCTGGGAGCTGCACGTTTACTATCTGAAATGGTGGAACCGATGTTGAAGGCAGCTATTGAGATATCTACTTTGCTTGCTCGGTCATTTTTCATGGGATTCTCTCTAACAATCTTGGCTCTTCTTGCTCGCCTTCGAGTTTTGGTTCAGCAAACACTACTTGATGTTGTTTCTGTCTTCAACATGGTTTCTTCTCTCTCCCAAAAGGAGCAGTCTGTAAAATTGACTCAAGCAGGAATTGAGTTTTTTAGGGAGTATTATCCAACAAATGAAGAATTTGTCACCCTTGAATGTGTGTGGGAAGCGGATAAGTTTGTATTGCTTGAGAGGATCAAGAAAATCGAGATGAAAAATCTAGATGGGGATCCCAGAGAAGATGTTTCTCTGGGAACATCAACCATACAATATCAAAGTATTGAGGCTTTACTTGCAGATGATGAACTTGGCTCCAAGAAGACAGACATGCTCCACAGTTCAGAAGAGGGTCCAACTCTGGTCAGTGAGGACAAATCTCTACTGGTGAATCCTTCCCTTGAAAGTGATGATGGGAAGCGGGTTGAAGATAGTGTGCAAGTTAGCAATGGTTCAGAAGTTGAAGGATCCTCTATTGAGAATCTCCTCCCAGAACAAGGCTTGCTTCCACACACAAGCTCATTTCCGAGTTCAAATCCTTTAAAACGTAAATTTGATTCAAGCAATAAAGTGGCTTTTGTCTCCGTGAAGAGACCTACAGTATCAGCAGCTACCACACCCTTTTTCCCTGTTGAGGAAATCAAAAGTGACAATGAAAACAAGGAAGATCCTTTTTTCAGTCTGCTTACTGGTGGAAACATAAAGGATAGCATCTTCTAA 1158 0.4076 MDSGIEVVEERLNSFTGQLQSECAILERIVYKNKNQHRRCSYFQYLLKVRRDLKLLQSANLEELLSSCFQVIHGKKPQQKVHLLESLKKRKGDGGKYNFMERLLGAARLLSEMVEPMLKAAIEISTLLARSFFMGFSLTILALLARLRVLVQQTLLDVVSVFNMVSSLSQKEQSVKLTQAGIEFFREYYPTNEEFVTLECVWEADKFVLLERIKKIEMKNLDGDPREDVSLGTSTIQYQSIEALLADDELGSKKTDMLHSSEEGPTLVSEDKSLLVNPSLESDDGKRVEDSVQVSNGSEVEGSSIENLLPEQGLLPHTSSFPSSNPLKRKFDSSNKVAFVSVKRPTVSAATTPFFPVEEIKSDNENKEDPFFSLLTGGNIKDSIF* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0347 385 MobiDBLite consensus disorder prediction 256 289 - -
Vvi17g0347 385 Pfam Domain of unknown function (DUF4477) 5 163 IPR027951 -
Vvi17g0347 385 PANTHER OS09G0504900 PROTEIN 6 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0347 Vvi-Chr17 3638212 3653709 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0347 - - vvi:100259501 726.087