Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0343 ATGCCATATTCTAAAGAAGCTCTTGCTAGGCTGTTCTACAATGTCTCCAGTTCTTTACAGCTTCTCTTCCTCTTCTTCTTCTTCTCCTCCATTTTGCTTGCAAAGCTCCTCCACTTCCTCTGCAACCACCCAATATTCCAAAGGACCCAACATGGATCTGCAGTTGGATTGTTTTTGGACGACGAAGAAGAGGAGGACATATATTTTCATGAGGAGGAGTGCATGGAGAAAGATGATCACCTGGTGGCCGACATAGTTGATGGTGGAGAATCACTTCTGTTTTTGCCTGTCAACCGTCCTGTGAAGGATCAAGATCTTGAGCATCATGAAGAAACCATAAGCAGTAGTACTACTCCTCGTGGCGATTACAACTACTTCTTCCACCAAGAAGAGTCAAGTGATGATCATAACTCACTGGTTCAAGAATCAGAAGTACATGATGACAAGGAAGATGAGGCTGAAGAAGAGATCCCAACATCAGATACTGATGCTGATGCGGTATACAATTTTGGCCCCAATGAAGGTGACCCCACCTCGCCGATAACCATCAATCTAACCAAAAGTGGCTTGGTGGCCGATGACGAAACCCATGACGAGAAACGCGACGAGGAAGATTCCAAAGGTGGTAAGGATAAAATTGAAGATGGGAAGGTGGAAGAGACTACAAATTTCACTAAAGATGAAAAGTTCTTAATTTTTGCGCCCCCTCAATCGGAGGCTAAGAAGTTTCATGTCCAAGAAAAGGATAATGAAGAGACTTGTGGCGACTCGTATACCGTTGGATCTACTTCTAAGAGCTCGTCTGAATGGAGAAGTTCCATTAATTTCAGGGATTCAGGGACAGAAGATCCATTTTCGTCCTCTTCCCGGAGGAGTTGCCCCAAGTGGGAATCTTACACTGTGTTTCAGAAGTATGATGAAGAGATGACATTCTTAGATAGGATCAGCGCCCAAAAGCTTCAGGAAACAGAGTCTCTTAGGTCAATCCAAGTCTGTCCAAAGTCAATCTCAGGGAGGATTGCTCATAAATTGGGAACAATCAACAAGAGATCATCAGATACCCATCAGAACCCGTATCATGAACTAGAAGCTGCTTATGTAGCACAAATTTGCTTAACATGGGAAGCTCTTAATTGGAACTACAAGAACTTTCAGCGCCTGAGAGCTTCGCGTCGTGAATGTGACCCCGGCAGTCCTGCTCATATTGCCCAGCAGTTTCAGCAATTCCAAGTGCTTTTACAGCGGTACATTGAGAATGAGCCCTATGAGCATGGCAAGAGACCTGAGATTTATGCTAGGATGAGAATTTTGGCACCAAAGCTGCTCCAAGTGCCAGAATATCGAGATTCTGAAGATGATCAAAAGGATGAAAGTCTGAAGTCAAGAATTTCGTCAGATTCATTTCTTATTATATTAGAAGAGGGAATAAGAACATTCATGAATTTTCTCAAGGGGGATAGGGAGAAACCTTGCCAGATCATAGCAGCTTTGTTCAAGAGGAACCGAAAAGGTTTGGTTGATCCAACTCTTCTACATCTGATGAAGAAAGCAAATCAGAAGAAGAAGTTAAGGCTCAAAGATCTCCGCAGAACTGGCAAGTGCTTAAGGAAAAGAAGGTTAAAGGAGGAGGAAGAAATGGAGATTCTGATGGGACTGATAGACATAAAAGTGGTGTCTAGGGTTTTGAGAATGAGTGACATAACAGAAGAGCAATTACACTGGTGTGAAGAAAAGATGAGCAAAGTGAGAGTTTTGGAAGGGAAGCTGCAAAGAGATTCCTCACCACTTTTCTTCCCTGCACACTGA 1806 0.4324 MPYSKEALARLFYNVSSSLQLLFLFFFFSSILLAKLLHFLCNHPIFQRTQHGSAVGLFLDDEEEEDIYFHEEECMEKDDHLVADIVDGGESLLFLPVNRPVKDQDLEHHEETISSSTTPRGDYNYFFHQEESSDDHNSLVQESEVHDDKEDEAEEEIPTSDTDADAVYNFGPNEGDPTSPITINLTKSGLVADDETHDEKRDEEDSKGGKDKIEDGKVEETTNFTKDEKFLIFAPPQSEAKKFHVQEKDNEETCGDSYTVGSTSKSSSEWRSSINFRDSGTEDPFSSSSRRSCPKWESYTVFQKYDEEMTFLDRISAQKLQETESLRSIQVCPKSISGRIAHKLGTINKRSSDTHQNPYHELEAAYVAQICLTWEALNWNYKNFQRLRASRRECDPGSPAHIAQQFQQFQVLLQRYIENEPYEHGKRPEIYARMRILAPKLLQVPEYRDSEDDQKDESLKSRISSDSFLIILEEGIRTFMNFLKGDREKPCQIIAALFKRNRKGLVDPTLLHLMKKANQKKKLRLKDLRRTGKCLRKRRLKEEEEMEILMGLIDIKVVSRVLRMSDITEEQLHWCEEKMSKVRVLEGKLQRDSSPLFFPAH* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0343 601 MobiDBLite consensus disorder prediction 191 219 - -
Vvi17g0343 601 MobiDBLite consensus disorder prediction 130 219 - -
Vvi17g0343 601 MobiDBLite consensus disorder prediction 246 292 - -
Vvi17g0343 601 MobiDBLite consensus disorder prediction 105 124 - -
Vvi17g0343 601 MobiDBLite consensus disorder prediction 130 146 - -
Vvi17g0343 601 MobiDBLite consensus disorder prediction 255 292 - -
Vvi17g0343 601 MobiDBLite consensus disorder prediction 147 161 - -
Vvi17g0343 601 Pfam Protein of unknown function (DUF1666) 361 599 IPR012870 -
Vvi17g0343 601 Coils Coil 525 545 - -
Vvi17g0343 601 PANTHER DNA LIGASE (DUF1666)-RELATED 11 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0343 Vvi-Chr17 3607716 3610110 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0343 - - vvi:100249284 1130.93