Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0334 ATGAGCCCATCGCAATTGAATGACCATGCACATACAAAAAATGGCTTGAAAATCAACAAGGACTCTCATTTGATCAAGAAATCATCACCACCGTCGTCATCCTCGTCATCGGCGATGGCCGTAAAGCCTCAGCAGCACCGCCATCCGGTCATCATCTACACACATTCACCGAAAATTATACACACTCATCCCAGGGACTTCATGGCGTTGGTGCAGAAGCTGACCGGGTTGTCGAGGTCGGATGACGACGGTCCAGCTCAGCAGGCGCAACGGAAGGCGGAAAAGGGCGATTTATCGGAGGATCATCGGAATAACGTGAAGGATGAAATGGAGTCAACTTCAGTAATCTCAGATGAGAATTGCAGCAGTGGTGCTACTGCCAATCTTGTAGATCCTCAATTCGCACCAGATTATCTTGTCCTGCATTCAGCAAGGAAATGA 441 0.4853 MSPSQLNDHAHTKNGLKINKDSHLIKKSSPPSSSSSSAMAVKPQQHRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDDGPAQQAQRKAEKGDLSEDHRNNVKDEMESTSVISDENCSSGATANLVDPQFAPDYLVLHSARK* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0334 146 MobiDBLite consensus disorder prediction 85 114 - -
Vvi17g0334 146 Pfam VQ motif 54 78 IPR008889 -
Vvi17g0334 146 MobiDBLite consensus disorder prediction 1 49 - -
Vvi17g0334 146 PANTHER F16F4.1 PROTEIN-RELATED 12 117 IPR039607 -
Vvi17g0334 146 MobiDBLite consensus disorder prediction 77 128 - -
Vvi17g0334 146 MobiDBLite consensus disorder prediction 25 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0334 Vvi-Chr17 3510768 3511729 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0334 - - vvi:104882346 248.44