Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0333 ATGGCCATGGCAAGCAAAACTAGAAATATGCTGGAGGGTCTGGTAAGAGAGGGATCATTCAAATGGTTGCTTGGCAGCAGGAGTTCCTTCAATGATGAAGTTGAGGAGATGGGAAAGTCTCCATCAGCTCGGAAAAATTGGATTCAGGAGCTTTCGCCTGTTGCAAATATTGTGGTCAGAAGATGCTCAAAAATCCTTGGCATTTCTACAATGGAACTTCGTGAAAGCTTTGATGCAGAAGCTTCTGATTCTATAAAGCATCCATCATGTTTTGCCAGGAACTTTTTGGAATACTGTTGTTTCAGGGCACTTGCTCTATCAACACAAGTAACAGGTCATTTGGCTGATAAAAAGTTTCGACGTCTAACATTCGACATGATGCTAGCGTGGGAAGCTCCAAGTGCCACCTGCCAACCGTTACTTAATGTGGGTGAAGATGCCGCTGTTGGGATAGAAGCCTTTTCAAGAATAGCTCCGGTGGTTCCTACCATTGCCAATGTGATTATCAGTGATAATCTTTTTGAGGTGCTTACAGCATCAACTGATGGTCGGCTTCAGTTCTCCATCTATGATAAGTACCTAACTGGACTAGAAAGAGCAATAAAAAAGTTGAAGTGCCAATCAGAGTCATCTCTTCTTTCTACTGTCCGGTCCTCAAGGGGAGAAAAGATCCTGGAAGTGGATGGGACGGTTACCACCCAACCAGTTCTTGAACATATAGGAATCTCTACATGGCCTGGTCGATTAATTCTCACAGATCATGCGCTTTACTTTGAAGCTCTTCGTGTCGTGTCTTATGATAAGGCCAAAATATACGATTTATCAGATGACTTAAAACAGGTCGTTAAACCTGAGTTGACAGGACCATGGGGTACACGACTTTTTGACAAGGCAGTTCTGTATAAATCAATTTCCTTATCAGAACCAGTTGTGATTGAATTTCCTGAACTTAAAGGACATACTCGTCGGGACCATTGGCTAGCCATTATCCGAGAAATTTTATATGTTCATAGATTTATTCATCAGTTCCAGATTAGTGGAGTTGAACGTGATGAGGCACTTTCAAAGGCTGTGCTTGGAATTCTGCGAGTGCAGGCCATTCAAGAAATTAGTTCTGCAGTTCCTCTTCGTAGCGAGGCTCTTCTCATGTTTAATCTTTGTGATCAGCTTCCAGGTGGAGACTTAATATTAGAAACACTTGCAAACTTGTCAACATCAAGGGAATTAGACAGGACTAACAATTCAGAGTTACTTTTTCCAGTTATGGAGCTTGGGAAGTTGCTTCTTTCTCTGGCATATTGGGATGACAGCAGAAAGTCTCTGGCATTCTGCTCAATTTTCACTTACATCATTTGGAGGGGATGGCTGGGTTATGCCTTGGCACTGATACTCATCTTTATTGCGGTCTTTATGGCACTTACGAGATGTTGTGGTCAAGGGAGGCCCGTTGAGGAAGTGAAGGTAATAGCACCTCCTACGATGAACACAATGGAACAGCTTTTGGCTGTGCAAAATGCGATTTCTAAAGCTGAAGTGTTCGTCCAGGATATAAACATTGTTCTGCTCAAGTTACGGGCCCTGTTGTTGGTCATTTTCCCTCAGGCAAGCCTCAAATTTGCAATGGCTCTCTTGCTCATAGCCGTGGTTTTGGCCTTGGTTCCCCTCAAGTTCATGGTTATACTGACCTTTCTGGAGACATTCACACATTATTCACCCCCAAGGAGAGCAAGCACAGAGAGATGGATGAGGAGATTCAGAGAATGGTGGTTTAGCATTCCAGCAGCTCCTGTTCTTCTTGAAAGAGAAAAGGAAGAGAAAAAGAGGAAGTGA 1830 0.4317 MAMASKTRNMLEGLVREGSFKWLLGSRSSFNDEVEEMGKSPSARKNWIQELSPVANIVVRRCSKILGISTMELRESFDAEASDSIKHPSCFARNFLEYCCFRALALSTQVTGHLADKKFRRLTFDMMLAWEAPSATCQPLLNVGEDAAVGIEAFSRIAPVVPTIANVIISDNLFEVLTASTDGRLQFSIYDKYLTGLERAIKKLKCQSESSLLSTVRSSRGEKILEVDGTVTTQPVLEHIGISTWPGRLILTDHALYFEALRVVSYDKAKIYDLSDDLKQVVKPELTGPWGTRLFDKAVLYKSISLSEPVVIEFPELKGHTRRDHWLAIIREILYVHRFIHQFQISGVERDEALSKAVLGILRVQAIQEISSAVPLRSEALLMFNLCDQLPGGDLILETLANLSTSRELDRTNNSELLFPVMELGKLLLSLAYWDDSRKSLAFCSIFTYIIWRGWLGYALALILIFIAVFMALTRCCGQGRPVEEVKVIAPPTMNTMEQLLAVQNAISKAEVFVQDINIVLLKLRALLLVIFPQASLKFAMALLLIAVVLALVPLKFMVILTFLETFTHYSPPRRASTERWMRRFREWWFSIPAAPVLLEREKEEKKRK* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0333 609 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 5 412 - -
Vvi17g0333 609 Pfam Plant protein of unknown function (DUF639) 416 602 IPR006927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0333 Vvi-Chr17 3489185 3510560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0333 - - vvi:100252490 808.905