Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0331 ATGGCGACCACCAAAGTCCAGAGGATTATGACCCAGCCCATTAATCTGATATTCAGGTTTCTTCAAAGCAAAGCTCGAATTCAGATTTGGCTATTTGAGCAGAAAGATTTGAGAATTGAAGGCAGAATCATAGGATTTGACGAGTACATGAATTTGGTTCTGGATGATGCTGAAGAAGTCAATGTCAAGAAAAACACAAAAAAGACTTTAGGAAGGATTCTCCTCAAAGGAGACAACATTACGCTGATGATGAATACGGGAAAATGA 267 0.3895 MATTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVKKNTKKTLGRILLKGDNITLMMNTGK* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0331 88 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN E 2 86 IPR027078 GO:0000398|GO:0005681
Vvi17g0331 88 FunFam Small nuclear ribonucleoprotein E 1 87 - -
Vvi17g0331 88 Gene3D - 1 86 - -
Vvi17g0331 88 ProSiteProfiles Sm domain profile. 16 88 IPR047575 GO:0003723
Vvi17g0331 88 Pfam LSM domain 20 83 IPR001163 -
Vvi17g0331 88 SUPERFAMILY Sm-like ribonucleoproteins 12 85 IPR010920 -
Vvi17g0331 88 CDD Sm_E 7 85 IPR027078 GO:0000398|GO:0005681
Vvi17g0331 88 SMART Sm3 19 85 IPR001163 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0331 K11097 - vvi:100257667 174.866