Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0328 ATGTTCTTGAAAATGCCCAGTAGAAACTCCGCCGTTACCACTGACAACTCCACTGCTCTCAGAAGATCTCCCAGGTTTCTCCATCAGAACAACCTTCCAGAACCACAAGGCCCCAAAACCCCTAAGCCCCAGTCCAGGAACAACCGGTCACGCTACTTGGATCATCCTCTCAGCTCAAAACCGAATGTTTCTGTGAAGAGAACCCGCAAGGATTCCGCTGGAAATATTACGGTGAAGTTGGGTCAATCGAACTCGTGCGTGAGTTCGAGTACCGGGTTGCGAAAATCTCCCAGATTGCAGAGTGGGGTTGAGGGTTTTTCAAATCCAGATGCTTCTCTGAAGAAAATCCATAAAGGTTGCACCGAAAAAGTAGGGAAGGATTTGAGGAAACCGAGTGCTGAGTTGCAAAAGTGCGTGAGTTTCAGCACTGGGCCGAGAAAATCTGCCAGGTTGCGTGGTGGGGTTGAGGGTTGTTCATCACCATACGCTTCTCTGCAGAAAACCCACAAAAATTGCGTGGAAAATATTGGGAAGGAATTGAAGCAATCTAGCGATGAGTTGAATAAATGTGTAAAATCGGTTACTGGGCCGAGAAAATCCTCAAGATTGAGCAAAGGTGTCAGGGAGTCTCCCAGGTATCCTTACCAAGAAAACGCGGGTGAACACGTCGAGATGATGCACCTCAAAGATGGGTTGAGAAAATCTGCAAGATTAGATAATGAGTTTGAGGTCTTTCAGGGCTTCAGACGGTCTCCAAGGTTTCCTAGTCAAGGAGACAACAATAATTGTGTTGATAGGACTGTTGACGGTAAGTGTAATAGGCTTAGTAATTCTGTCTTGATTGAGTCTTCCAAGGAAGATGCTTTAGTGGCTGTTAGTAAAGAAGAAATGGGGAAGAGGGAAACAAGGTTGAGTAGTAGCTATGTTGCTTCTCCAGCCACCGCACTTGCTGGAAGGGATAGTAAGAGGAAAGATATCAATATAGGCAGTACGGAAATTGAGGGTAGCAGGAAAAGAAAGCTAGGGGAGGAGGGTGACATTGGCCTTCTCTCCGGATGGACAAAGGAGCAAGAACTAGCACTGCAGAGGGCTTATTTTGCTGTAAATCCTACACCCCATTTTTGGAAGAAGGTTGCTAAATTGGTCCCTGGAAAGTCTGCACAGGATTGCTTTGACAAAGTCCACTCTGACCACTTAACCCCACCTCCACATCGGCCTCGTTCAAGGGCAACCAGATCAAACTCTTCATCTCAGGTTTCTGTCCCACTTTCTGCAAGTAAAATACTTAGGCCTGCTGAGCCAAAGATTAAAAGGCCAGGATGCAGTAAAAAGAAGACTCATCGTACCCAGAAAGCTATGAGGGATTTGCTGCAAAAGCATTATGAAGTGGACCAAGATTATGAAGCGGATTTGTTCTCAGTTCTTGAGCCCACAGCAACTCCATCTACTCAAACTTCCCAGCATAGTGTGATGCTCTCCACCCCAGAGCATGTACAGGGAAAATTGACGTTTCTTCAGAAGCTCCGTGAGAGATCTTCTTCAGACCATAAGAAACCCCGTTCAAGATTCAGTACCTCTTTTGGAAGTGCTCTTGTAAGTTCTCCAGTCCTAAAGCCAGTGAAGAATAGGGCCTTACATGAGAAATACATTGATCAATTACACAGCAGGGAAGCTAGAAGAAAAATGGCATCAGTACAGGCAGCAAAATCCACTCTTGGAGAAGAGGATAGAAAGGAGAATCATGTCCAGAAAATGAATGCGATTACAGCTGCAAGAAATGCTCTGGTTTGTGATGCAAGGGATGCTATCAATCAGTTCCAATATCTACAGGCCAATCCCTTGTCTAACTCTTGTGAGTTTGATGGTGATGGTGTTAATGTTGATGAGGATGATGAAGGTGAAGATGGAACTTAA 1914 0.453 MFLKMPSRNSAVTTDNSTALRRSPRFLHQNNLPEPQGPKTPKPQSRNNRSRYLDHPLSSKPNVSVKRTRKDSAGNITVKLGQSNSCVSSSTGLRKSPRLQSGVEGFSNPDASLKKIHKGCTEKVGKDLRKPSAELQKCVSFSTGPRKSARLRGGVEGCSSPYASLQKTHKNCVENIGKELKQSSDELNKCVKSVTGPRKSSRLSKGVRESPRYPYQENAGEHVEMMHLKDGLRKSARLDNEFEVFQGFRRSPRFPSQGDNNNCVDRTVDGKCNRLSNSVLIESSKEDALVAVSKEEMGKRETRLSSSYVASPATALAGRDSKRKDINIGSTEIEGSRKRKLGEEGDIGLLSGWTKEQELALQRAYFAVNPTPHFWKKVAKLVPGKSAQDCFDKVHSDHLTPPPHRPRSRATRSNSSSQVSVPLSASKILRPAEPKIKRPGCSKKKTHRTQKAMRDLLQKHYEVDQDYEADLFSVLEPTATPSTQTSQHSVMLSTPEHVQGKLTFLQKLRERSSSDHKKPRSRFSTSFGSALVSSPVLKPVKNRALHEKYIDQLHSREARRKMASVQAAKSTLGEEDRKENHVQKMNAITAARNALVCDARDAINQFQYLQANPLSNSCEFDGDGVNVDEDDEGEDGT* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0328 637 Gene3D - 351 413 - -
Vvi17g0328 637 MobiDBLite consensus disorder prediction 1 106 - -
Vvi17g0328 637 MobiDBLite consensus disorder prediction 616 637 - -
Vvi17g0328 637 MobiDBLite consensus disorder prediction 7 106 - -
Vvi17g0328 637 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 240 584 - -
Vvi17g0328 637 MobiDBLite consensus disorder prediction 392 451 - -
Vvi17g0328 637 SUPERFAMILY Homeodomain-like 352 395 IPR009057 -
Vvi17g0328 637 MobiDBLite consensus disorder prediction 407 424 - -
Vvi17g0328 637 CDD SANT 353 393 IPR001005 -
Vvi17g0328 637 MobiDBLite consensus disorder prediction 623 637 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0328 - - vvi:104882347 1207.59