Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0315 ATGGGAAATGAACATCAGCGACTTCCTATGGTTTCTATGTTTTTCAATTCCAACTCAGTGTTGAGGCATGTCTTTCATCTCCTGTATTTTGTCATTGGTTTATCCCTTGGAATCAAGGTCGGTTTCTATGTCAAGAGTTCCTCATTCGATCTTCAAGCTATTATAAGCTTTACGGCACCTCAACCAGCCGCAGCACCACCACCCTTATTGGTAACGCTGCCACCACCACCGGCACCATCACCTCTGCCACAACCACCATCAGCATCAGCATCGCCGTCACCATCGCCATCTCCATATCCACCACCTGATGGTACTTTGGCCTCACAAGATAAGCCAACGCTCATGCACAGTATGGATGATGATGAGTTGTTCTGGCGAGCATCTATGGTTCCAAGGATTCAACAATTCCCATATGAGAATGTCCCTAAAGTTGCTTTCATGTTCTTGACAAAGGGACCTATACCTTTAGGCCCCTTATGGGATTTATTCTTCAAAGGGCATGAAGGGTTTTATTCTATTTATGTTCACCCTCATCCTTCCTACAATGATTCAGTGCCTGAAGATTCTGTTTTCCATGGAAGAAGAATTCCCAGCAAGGCAGTCAAATGGGGAAGAGCAACAATGATAGATGCAGAGAGACGCCTTTTGGCCAACGCCCTCCTGGACTTCTCTAATGAAAGATTTGTGCTCCTCTCAGAGACTTGCATACCTTTGTTCAACTTCACAACAATATATAGCTACATCATCAATTCTAATCAAAGTTTCATTGCTTCATACGATGATCCAAGGAAGGTGGGCCGAGGTCGTTACAATCCTCAAATGTCACCTACAATCAACATATCCGAATGGCGTAAAGGGTCACAATGGTTTGAGGTTCATCGCGAGCTAGCCATTGAAATTGTATCAGACAAGAAGTACTACCCCGTCTTTCGAGAGCATTGTCATGTCCCTTGTTACATGGATGAACATTATATCCCTACACTCATCAACATTCTTGCTCCAGAAAAGAACTCCAACAGGACCATTACCTGGGTTGATTGGTCTAAGAGCGGTCCACATCCTGGAAGATTTATTAGGCAAGATGTTACTCTCGAGTTCCTGAATCAAACGAGGTTTGGTACCAATTGTACGTATGGTGGCAACACAACGTCTATGTGTTTCTTGTTTGCCAGGAAATTTGTACCCAATACTTTGCAGCCCTTGTTGCAGCTTTTGTCCCTCGATTTTAGTCATTAA 1236 0.4385 MGNEHQRLPMVSMFFNSNSVLRHVFHLLYFVIGLSLGIKVGFYVKSSSFDLQAIISFTAPQPAAAPPPLLVTLPPPPAPSPLPQPPSASASPSPSPSPYPPPDGTLASQDKPTLMHSMDDDELFWRASMVPRIQQFPYENVPKVAFMFLTKGPIPLGPLWDLFFKGHEGFYSIYVHPHPSYNDSVPEDSVFHGRRIPSKAVKWGRATMIDAERRLLANALLDFSNERFVLLSETCIPLFNFTTIYSYIINSNQSFIASYDDPRKVGRGRYNPQMSPTINISEWRKGSQWFEVHRELAIEIVSDKKYYPVFREHCHVPCYMDEHYIPTLINILAPEKNSNRTITWVDWSKSGPHPGRFIRQDVTLEFLNQTRFGTNCTYGGNTTSMCFLFARKFVPNTLQPLLQLLSLDFSH* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0315 411 MobiDBLite consensus disorder prediction 68 105 - -
Vvi17g0315 411 Pfam Core-2/I-Branching enzyme 144 369 IPR003406 GO:0016020|GO:0016757
Vvi17g0315 411 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 51 403 IPR044174 GO:0016757
Vvi17g0315 411 MobiDBLite consensus disorder prediction 68 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0315 Vvi-Chr17 3284712 3286199 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0315 - - vvi:100257764 746.503