Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0314 ATGAAGAATGGACAAGCACAACGCCCATCAACCGCAAATCCAAAGATCTTGAGCCTCTTCAATCTTATGTGCTTTTTTCTCTTCTTCGGCTCAGGTTTAGCCATTGGACTAACAGTTAGTTTCTACCTTCAAGATTTCTCCTTCAACATACAACTCAAACAATTCTCTACCCCAATTCCAACCACGAATAGAACTGAAAAATCTAGTCGAATTGGATTGAAAGAGTACGTGAAGCCCCCTAATGTTATACATGACATGAAAGATGCGGAGTTGCTATGGAGAGCTTCAATGGTGCCTCGGGTTGGAGAGTTCCCCTTCAAGCGTGTCCCCAAGATTGCATTCTTGTTTTTGACGAGAGGGTCATTGCCATTAGCTCCTCTTTGGGAGATGTTCTTCAGAGGGCATGAGGCGCTGTATTCAATTTATGTGCATTCAGATCCATCTTTCAATCGAACAGTGCCTAAAAGCTCTGTGTTTTATGGCCGGAGTATCCCCAGTCAGGAAGTGCAGTGGGGAAACTTCAGCATGCTCGAAGCCGAGCGCCGTCTATTAGCCAATGCACTTCTCGACATCTCCAACCACCGCTTTGTCCTCCTCTCTGAGTCATGCATTCCCCTATTCAACTTCTCCACCATCTACTCTTACTTAATGGCCTCTACAAAATCCTTCATAGAGGCCTATGATTTACCAGGGCCCGTGGGGCGTGCCCGTTACGACCATAGAATGAAGCCTATTGTCACTATTGGGCAATGGCGAAAGGGGTCCCAGTGGTTCGAGATGGACCGTGGCCTAGCCATTGAGGTAATATCTGATCGGAAATATTTTGCAGTGTTCCGAGAATGTTGCGAGGCCTCGTGTTATGCAGACGAGCACTACTTGCCTACACTTGTGAGTATCGAATTTTGGAGGAGGAATGCGAATAGGAGCTTGACATGGGTTGATTGGTCCAATGGCGGTGCCCACCCAGCTGGGTTTTGGAGAAGAGATGTGACCGTCGAATTCTTACAGAGCTTGAGGACTGAAAGTCATTGCCAGTACAATGGGAACAACACCGATATTTGCTTCTTGTTCGCTAGGAAATTCTTGCCTGGCACTCTGAATAGGCTTTTGAGGGTTGCTCCTAAGCTCATGAAATTCAATTGA 1143 0.4654 MKNGQAQRPSTANPKILSLFNLMCFFLFFGSGLAIGLTVSFYLQDFSFNIQLKQFSTPIPTTNRTEKSSRIGLKEYVKPPNVIHDMKDAELLWRASMVPRVGEFPFKRVPKIAFLFLTRGSLPLAPLWEMFFRGHEALYSIYVHSDPSFNRTVPKSSVFYGRSIPSQEVQWGNFSMLEAERRLLANALLDISNHRFVLLSESCIPLFNFSTIYSYLMASTKSFIEAYDLPGPVGRARYDHRMKPIVTIGQWRKGSQWFEMDRGLAIEVISDRKYFAVFRECCEASCYADEHYLPTLVSIEFWRRNANRSLTWVDWSNGGAHPAGFWRRDVTVEFLQSLRTESHCQYNGNNTDICFLFARKFLPGTLNRLLRVAPKLMKFN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0314 380 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 39 370 IPR044174 GO:0016757
Vvi17g0314 380 Pfam Core-2/I-Branching enzyme 112 338 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0314 Vvi-Chr17 3280283 3282822 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0314 - - vvi:100252627 776.933