Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0313 ATGAAGAATGGAAAAGAAGAAAGCCCAGCACCCTCAAGTGCCAAGATCTTCAACACCCCAACACCCCTCTTTAATCTAATGTCCTATTTTCTTTTCTTTGGCTTAGGTTTAGCCATTGGACTAATCATTAGTTTCTCCCTCAACATACAACTCAAACAATTCTTTGTCCCGACTCCTGATCAAACTACATCACCTCTTCCAATTCCCATCGCAAATGAAACCAAGAAAATTAACCGAATTGGGTTGAAAGAGTACTTGAAGCCTCCTAAGGTTGCACATGATATGACAGATGAGGAGTTGCTATGGAGAGCTTCAATGGTGCCTCGGGTTGGAGGGTTCCCTTTCAAGCGTGTCCCCAAGGTTGCATTCTTGTTTTTGACGAGAGGGCCATTGCCGTTGGCTCCATTTTGGGAGTTGTTCTTTAAAGGGCATGAAGGGCGCTATTCCATTTACGTGCATTCTCATCCATCCTTCAATGCAACTCTAGTCCCACAAAGCTCTGTGTTCCATGGCCGGAGAATCCCCAGTAAGGAGGTACAATGGGGAAAGTTCAACATGGTGGAAGCCGAGCGCCGCCTATTGGCCAATGCACTCCTCGACATCTCAAACCAACGTTTCGTTCTCCTCTCTGAGTCATGCATTCCTCTGTACAACTTCTCCACCATCTATTCTTACCTAATGGGCTCCAAAAAATCCTTCGTGGAGTCCTATGACTTACCAGGACCCGTGGGCCGTGGCCGATACAACCCACGAATGAAGCCGCTCATCAAAATGGAGCAATGGCGAAAAGGGTCTCAATGGTTCGAGATGGACCGTGGCCTAGCCATCCAGGTTATATCTGACCGGAAATATTTTCCGGTGTTCCAAAAATTCTGCACGCCTCCATGTTACGCAGACGAGCACTACTTGCCCACACTGGTGAGTGTGAAATTTTGGAGGAGGAACTCAAACAGGAGCCTGACATGGGTTGATTGGTCCCATGGTGGTGCCCACCCAGCTAGGTTTTGGAGAGTAGCTGTGACCGTTGATTTCTTGAAAAAGCTGAGGAATGGGAGCCATTGCCATTACAATGGAAAAAGTAGTAACACCTGCTTCATGTTCGCAAGGAAGTTCTTACCTAACGCTTTAGATAGGCTGCTGAGGTTCGGCCCTAAGCTCATGAAATTCAATTGA 1173 0.4706 MKNGKEESPAPSSAKIFNTPTPLFNLMSYFLFFGLGLAIGLIISFSLNIQLKQFFVPTPDQTTSPLPIPIANETKKINRIGLKEYLKPPKVAHDMTDEELLWRASMVPRVGGFPFKRVPKVAFLFLTRGPLPLAPFWELFFKGHEGRYSIYVHSHPSFNATLVPQSSVFHGRRIPSKEVQWGKFNMVEAERRLLANALLDISNQRFVLLSESCIPLYNFSTIYSYLMGSKKSFVESYDLPGPVGRGRYNPRMKPLIKMEQWRKGSQWFEMDRGLAIQVISDRKYFPVFQKFCTPPCYADEHYLPTLVSVKFWRRNSNRSLTWVDWSHGGAHPARFWRVAVTVDFLKKLRNGSHCHYNGKSSNTCFMFARKFLPNALDRLLRFGPKLMKFN* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0313 390 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 47 380 IPR044174 GO:0016757
Vvi17g0313 390 Pfam Core-2/I-Branching enzyme 121 348 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0313 Vvi-Chr17 3272925 3275178 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0313 - - vvi:100247520 738.413