LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi17g0308	ATGCATCCCAATTTGTCCCCTTCTTCCTTGGTCATCCCTGCCATCATCTTTCTCCTCTCCCACCAATTCTCAAACTTTGTATGCAGTGACGAATTTCACTATTCAAACTGCAATTCTCCGGTGGAATGCGGTGGATTGGGCAAAATCGAGTACCCTTTCTGGGTAAACGGCGCCCAGCCTGATTACTGTGGCCATCCCAGGTTCAAGCTGGATTGCCTGCGTGGTGATTTTCCCACCATACAGATCATGCACCGGGACTATCTTGTCATGGACATCGATTATGACACCCAAATCCTAAAGATGGCGACCTTCTATGAATTCTTTTGTCCTGAATTCGACATAACCATGGATTCAACTCTCTTCAGCTATACTTCCGACGTTGAAATCGCCACCGTATTTTACGATTGTTCCTCCACTGATCCACACCCAGGATCTTACAACTTTTCCTGCGTGATCGATAGCTTTCCAAGCCACGCTTATTTGGTTACGAATACGTCAGCGGCAAGTGAGTTCGCATCGGAATGCAAGTTCAGTGCTTCAGTTCCAGTGGTCGTGCCAAAGTCAGCAGACGGTGTGAAAGAGATATTGAGTTCCGTGTTTAAGGTGAACTGGACGGTAAACAAGACAGAATGCGATGAATGCGTTGGGTCTGGGGGTAGGTGTGGATATAACAGCACCTTGGACCAACCTTGCTGTTTTTGTCCTGATAACCCTTACCGAAACAAATGTCCAAATCTACGTTCAAGTATGTACCCCTCTTCTCTTTCCATGCTTTTCAGTCTTTGA	786	0.4644	MHPNLSPSSLVIPAIIFLLSHQFSNFVCSDEFHYSNCNSPVECGGLGKIEYPFWVNGAQPDYCGHPRFKLDCLRGDFPTIQIMHRDYLVMDIDYDTQILKMATFYEFFCPEFDITMDSTLFSYTSDVEIATVFYDCSSTDPHPGSYNFSCVIDSFPSHAYLVTNTSAASEFASECKFSASVPVVVPKSADGVKEILSSVFKVNWTVNKTECDECVGSGGRCGYNSTLDQPCCFCPDNPYRNKCPNLRSSMYPSSLSMLFSL*	262

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi17g0308	261	Pfam	Wall-associated receptor kinase C-terminal	162	236	IPR032872	-
	Vvi17g0308	261	Pfam	Wall-associated receptor kinase galacturonan-binding	37	101	IPR025287	GO:0030247
	Vvi17g0308	261	PANTHER	OS01G0690200 PROTEIN	12	243	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi17g0308	Vvi-Chr17	3231773	3232558	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi17g0308	29	225	Receptor kinase-like Gene Family	AT1G66930	29.596	8.91e-21	89.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi17g0308	-		-	vvi:104882349	550.821