Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0303 ATGTTGGGGACTAGTTTGCAGCTTCGGCGGGCTCATGGTGAGGATCGGTTCTACATTCCCGTGAAAGCGAGGAAGAATCAGAATCAACAAAGGCAACAGCTTCAGAAAGCTAAGAGTGATGTGACTGAGAAAACCGCTTCATCTGCAAAGAGCAAAACTGCGATTTCTGAGAATAGAAACCCTGAGGCATCCTCATGTTCGATTGCTAAGCCTTCTTCCGAGCCGTCCACAGCTCCTTCTAACCTTGATCGGTTCTTGGAATCGACGACTCCTTCAGTGCCGGCGCAGTACTTCTCTAAGACTACAATGAGGGGATTGAGGACTTGTGACATTGAGTTTCAACATTACTTCACATTGGGTGATTTGTGGGAATCTTTTATGGAATGGAGTGCGTATGGGGCAGGAGTGCCTTTGGTATTGGATGGGAGTGATCCTGTTGTTCAATACTATGTCCCATATTTATCAGGCATACAATTATATGTTGAATCTACAACTTCGAATGCTAAATCAAGGCAAGCTGGCGAGGACAGTGATGGTGACTATTACAGGGACTCAAGTAGTGATGGAAGTAATGATTACGAATTTGAAAAAGGGATGAAGTTTTCTAGGGAGCAGCAGGCTTGTCACCATCCAGCAAGTGATGTTCCTATTCAAATGGGCAGGTTGTCTTTAAGGGAAAAACACAATACAATTCAAGAAGGCTTTTCTAGTGATGATAGTGAGGCTAGCAATTCTCATGGTCACCTGATTTTTGAGTTTCTTGAGCACAATCCTCCTTATGGTCGAGAACCGTTCGCCGACAAGATACTAGATCTTGCACGTGAGTATCCTGAGCTGAAAACACTAAGAAGTTGTGACCTGCTGCCTGTCAGTTGGATGTCTGTGGCATGGTAA 894 0.4463 MLGTSLQLRRAHGEDRFYIPVKARKNQNQQRQQLQKAKSDVTEKTASSAKSKTAISENRNPEASSCSIAKPSSEPSTAPSNLDRFLESTTPSVPAQYFSKTTMRGLRTCDIEFQHYFTLGDLWESFMEWSAYGAGVPLVLDGSDPVVQYYVPYLSGIQLYVESTTSNAKSRQAGEDSDGDYYRDSSSDGSNDYEFEKGMKFSREQQACHHPASDVPIQMGRLSLREKHNTIQEGFSSDDSEASNSHGHLIFEFLEHNPPYGREPFADKILDLAREYPELKTLRSCDLLPVSWMSVAW* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0303 297 MobiDBLite consensus disorder prediction 23 86 - -
Vvi17g0303 297 MobiDBLite consensus disorder prediction 165 194 - -
Vvi17g0303 297 MobiDBLite consensus disorder prediction 1 86 - -
Vvi17g0303 297 Pfam Protein of unknown function (DUF789) 80 297 IPR008507 -
Vvi17g0303 297 PANTHER T15D22.8 20 297 - -
Vvi17g0303 297 MobiDBLite consensus disorder prediction 173 194 - -
Vvi17g0303 297 Coils Coil 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0303 Vvi-Chr17 3175959 3178995 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0303 - - vvi:100244012 564.688