Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0300 ATGGCGGTGGCGACACCCACGACCTTTGGGTTCAAGAATTTGATAGAGACGTTCACGGTGGATGTGCAGAGAGCGGAGGGGAGGCCCTTGAATGTGCCCTTGATCGCCCCTTTTACTATTGCATCGTCGAGGCTGGAGAGGGTGGAGAACGTGGCGATTAGAATTGAGTTGAAGAATGGGTGTGTGGGGTGGGGTGAGGGCCCGATTCTGCCGTTTGTGACTGCGGAGAATCAGGCGACAGCGATGGCTAAGGCGGCGGAGGTTTGCGAGGTTCTGCGGCGGAGACCGGCGATGACTCTGGGTATGTTGTTGGGTGAGATTGGTGAGGCTCTTCCTGGTCATGAATTTGCTTCTGTTAGGGCGGGAGTTGAGATGGCATTGATTGATGCAGTTGCTAATAGCATGGGCATCCCTTTGTGGAGACTATTTGGTGGAGTGTCAAATGCCATAACTACTGATATAACAATTCCAATTGTTTCCCCTGCTGATGCTGCTGAATTGGCTACAAAGTATCGCAAACAAGGATTCAAGACCTTGAAGCTTAAGGTGGGAAAGAATCTGAATGCAGACATAGAAGTTCTTCAAGCCATTCGTGTGGCACACCCTGATTGCTTATTTATCTTGGATGCTAATGAAGGATACACTCCAAAGGAAGCCATTGAAGTTCTTGAAAAGCTACATGAAATGGGAGTGACTCCTGTTCTATTTGAACAACCTGTTCATAGGGATGATTGGGAAGGTCTTGGTCATGTTAGTAAAGTTGCAAGAGACAAATATGGGGTATCTGTTGCCGCTGATGAGAGCTGCCGGAGTTTAGTTGATGTTAAGAAAATAGTGGAAGGAAACCTTGCAAATGTCATTAATATTAAACTAGCAAAAGTTGGGGTCCTTGGGGCCCTTGAAATTATTGATGCAGCAAGAGCAGCGGGGCTTGATCTAATGATAGGTGGCATGGTTGAAACTAGATTAGCGATGGGCTTTGCTGGCCATCTTGCTGCTGGCCTTGGGTGTTTCAAATTCATTGACCTAGATACACCTCTTTTGCTGTCAGAAGATCCCGTTCAGGAGGGATATGATGTCTCGGGTGCTGTTTACAAGTTCACAAATGCCAGGGGCCATGGTGGTTTCCTTCATTGGGATAATATTAAATTAAACTTTGGTTGCTTCCACAACTTCAAAACTCTGAGCAACAGCAGATCTTATTAG 1206 0.4677 MAVATPTTFGFKNLIETFTVDVQRAEGRPLNVPLIAPFTIASSRLERVENVAIRIELKNGCVGWGEGPILPFVTAENQATAMAKAAEVCEVLRRRPAMTLGMLLGEIGEALPGHEFASVRAGVEMALIDAVANSMGIPLWRLFGGVSNAITTDITIPIVSPADAAELATKYRKQGFKTLKLKVGKNLNADIEVLQAIRVAHPDCLFILDANEGYTPKEAIEVLEKLHEMGVTPVLFEQPVHRDDWEGLGHVSKVARDKYGVSVAADESCRSLVDVKKIVEGNLANVINIKLAKVGVLGALEIIDAARAAGLDLMIGGMVETRLAMGFAGHLAAGLGCFKFIDLDTPLLLSEDPVQEGYDVSGAVYKFTNARGHGGFLHWDNIKLNFGCFHNFKTLSNSRSY* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0300 401 PANTHER O-SUCCINYLBENZOATE SYNTHASE-RELATED 6 383 - -
Vvi17g0300 401 SUPERFAMILY Enolase C-terminal domain-like 134 382 IPR036849 -
Vvi17g0300 401 Pfam Enolase C-terminal domain-like 165 374 IPR029065 -
Vvi17g0300 401 Gene3D - 29 135 IPR029017 -
Vvi17g0300 401 SFLD o-succinylbenzoate synthase 25 356 - -
Vvi17g0300 401 SUPERFAMILY Enolase N-terminal domain-like 22 145 IPR029017 -
Vvi17g0300 401 SFLD Enolase 25 356 - -
Vvi17g0300 401 SMART MR_MLE_2 161 255 IPR013342 -
Vvi17g0300 401 Pfam Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 33 144 IPR013341 -
Vvi17g0300 401 CDD L-Ala-DL-Glu_epimerase 28 349 IPR034603 GO:0016855
Vvi17g0300 401 Gene3D - 136 364 IPR036849 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0300 - - vvi:100250697 755.362