Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0298 ATGAGAAGAACTTTGCTGAGAAACGTCTCCCTCTGCACTCGGACTCTTCTCTCTCCCTCCTCCTCCAAGCCAAGCGCTTCTCCAACTCCCATTTCGTCTTCAGCTTCGGCTTCATCTGCTTTCAAGTTCCGATTTTTCTCATCCGAAAATGACTCATCAACAGAAAATCCCAAACCCCTTGAAGAAACCAGCTTGGCCCAACCCCAGAAGAAGGAAGTCTCCATCGATGTTCCCGATGTCAGCAATAAGGAGCTGAAAATGCGGATAGAGAAATACTTCAAAGGTGATGAGGAGGCACTTCCTTCAATTCTTGAAGCAATAATGGCAAGGAAGTTGGCTGGGAAGCACGAGGACACGGATGATGAGTTGATGGATGAACTTCGCCTCCAGCCACTAGATGATGTTAAAGACAAAGATTTTGAATCAGATTTTGAGGAAATCTATGAAACTGATGAAGAGATTGATGATTTGTACAATGCAAGGGATATTGTGATGAAGAGAATGGCGCATGATGAGTACTTCAACATGGATGACCGAAAGTGGGATGACATGATTAAAGAGGCAACTGAGAAAGGGTTTCTTAAGGATACTGGAGAATGTGAGCGAATTCTAGAGGATATGCTTAGCTGGGATAAACTTCTTCCAGATGAGATAAAGCAAAAGGTTGAACAGAAGTTCAACGAGCTGGGGGATATGTGTGAAAGAGGGGAGCTTGAACCTGAAAAGGCTTATGAGCTGTTCAAGGAGTTTGAGGATAAGATGGTCATGGAATGTGCACAGTTGATGGAGGCCGAGGGACCCCCGCAGTTTGATGAGACACCAGAGCCAGACAAAAAATTGCGTTTAGATGATCCACCAGGTGAGGGGCCAATCCTTAGGTGGCAAACACGTGTAGTTTTTGCTCCTGGTGGTGATGCATGGCATCCCAAAAACAGAAAGGTCAAAATGGCAGTTACTGTGAAAGAGCTTGGTCTGTCGAAACATCAATTTCGTCGGTTGAGAGAATTAGTTGGAAAACGGTATCATCCAGGGAGAGATGAGCTTACAATCACCAGTGAGAGGTTTGAACACCGTGAGGAGAACAGAAAGGATTGTCTTAGGACTTTATTTTCACTCATTGAGGAGGCTGGAAAAGCTAATAAGCTGGCAGAGGATGCTCGAGCTTCATATGTCAAGGATAGACTCAGAGCGAATCCTATGTTCATGGAGAGGTTGCGAGCTAAGACCATGAGATTGCAGGGATCTAATTCTGCAGCTGCTTGA 1263 0.4505 MRRTLLRNVSLCTRTLLSPSSSKPSASPTPISSSASASSAFKFRFFSSENDSSTENPKPLEETSLAQPQKKEVSIDVPDVSNKELKMRIEKYFKGDEEALPSILEAIMARKLAGKHEDTDDELMDELRLQPLDDVKDKDFESDFEEIYETDEEIDDLYNARDIVMKRMAHDEYFNMDDRKWDDMIKEATEKGFLKDTGECERILEDMLSWDKLLPDEIKQKVEQKFNELGDMCERGELEPEKAYELFKEFEDKMVMECAQLMEAEGPPQFDETPEPDKKLRLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKMAVTVKELGLSKHQFRRLRELVGKRYHPGRDELTITSERFEHREENRKDCLRTLFSLIEEAGKANKLAEDARASYVKDRLRANPMFMERLRAKTMRLQGSNSAAA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0298 420 Gene3D - 292 415 - -
Vvi17g0298 420 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28 1 413 IPR039848 GO:0003735|GO:0032543
Vvi17g0298 420 Pfam Mitochondrial ribosomal subunit protein 308 385 IPR019349 -
Vvi17g0298 420 MobiDBLite consensus disorder prediction 16 70 - -
Vvi17g0298 420 MobiDBLite consensus disorder prediction 16 72 - -
Vvi17g0298 420 FunFam Ribosomal protein S24/S35 296 415 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0298 K17413 - vvi:100256054 788.489