Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0293 ATGGCGCTTCGGCATTCGGAACCTGTATGCTTCTCCCATTTCTGCCCGGCCCGGTTCCGGTCCAGACGACAACTTCGAGTCTCGAGGGCCGGCTCGTCGGTCCCGAGGTTGAGGCCGCCGGCGGTATTGGTGGCGGCGGCGAGGGAAGCGCATGTGAACAAGCCTTCTGTTTGTACTGCGGATGAGCTTCACCGCGTGGCTGTCACCGACTCCGACTGGAGCCTCGCTCTGTGGCGGTACACACCTTCTCCGAAGGCGGAGCGGAGGAATCACCCGCTGTTGCTGTTGTCTGGCATTGGAACCAATGCTATTGGATTTGATCTTGCTCCTGAGTCTTCTTTTGCACGTTACTTGTCCAACCAAGGATTTGATACATGGATTCTTGAACTTCGAGGTGCTGGGTTGAGCACATTAGTAGGGGAATCCAGGGAAGTTAAGAAGCCTTTCAAGGCTATGTCTGATCGGGTAGGAACAAATGGTGTTCTTCCTGCAGAAGCACCATCAACCGTAATTTCTGGCACTCTTGTGGAAACTTTTATCCCTTCTGTCAAAGGAAAAAGAATGGTGGTTGAATCTGATGACGCACAATCGGTGTCAAAGTTGTCAGAAACTTCTACTCACTTATTTCAAAAGCTCTCTAGGTTTCTAAATGAAGGTGTATTTGAAGAAAGGCAAAACTTCTCTATTGCTAGTCAGATCAGGGATTTGAGTGGAAGGCATGTAAACATTATTAAAGAAGGTCAATGGACGATTTCACCACCCTTGTTTGACTTGAAGGAGGTTTTTTTAACACTACTCGATGATTTCCAAAAGCAACTTGACCTGATTTTAAAGTACAACTGGGACTTTGATCACCATATGAAAGAGGATGTGCCTGCAGCGATGGAGTATATAAGGACTCTATGCAAACCAAAGGATGGCAAGTTGCTTGCAATTGGTCACTCCATGGGGGGTATATTGCTGTATGCAATGCTTTCACAATCTGGTTCTGAAGGAAGGGATTCTGGGCTGGCATCAGTCATTACATTGGCATCATCACTTGACTTCACATCTTCAAAATCATCACTGAAATTGCTCTTACCCCTGGCTGATCCTGCACAAGCTCTAAATGTACCTGCTATTCCATTAGGGGCATTGTTGGCAGCTGCTCATCCTCTTATGTCTCTTCCTCCTTATGTATTGTCTTGGTTAACTTCTCTGGTTTCTGCACAGAAGATCCCTCCTGAGTCACTTGAAAAACTTGTCTTGAACAACTTTGGTACAGTACCCTCTAAGCTCCTCTTGCAGCTAACAACAGCTTTCCAAGAGGGTGGACTACGTGACAGAAATGGAACTTTCTTTTATAAGCATCATCTCCACAAAAGCAATGTTCCTGTTCTAGCAATTGCAGGAGACCGAGACGTAGTCTGTCCACCTGAAGCTGTATATGAGACAGTCAAGCACATTCCTGGGAATTTAGTTACTTACAAAGTTTTTGGAGAACCAGATGGTCCACATTATGGTCACTATGACTTAGTAGGAGGCCCTTCGGCAGCTGATCAAGTGCATCCATGTTTATCTAAATTTCTCATCCATCATGATATGGCCTGA 1590 0.461 MALRHSEPVCFSHFCPARFRSRRQLRVSRAGSSVPRLRPPAVLVAAAREAHVNKPSVCTADELHRVAVTDSDWSLALWRYTPSPKAERRNHPLLLLSGIGTNAIGFDLAPESSFARYLSNQGFDTWILELRGAGLSTLVGESREVKKPFKAMSDRVGTNGVLPAEAPSTVISGTLVETFIPSVKGKRMVVESDDAQSVSKLSETSTHLFQKLSRFLNEGVFEERQNFSIASQIRDLSGRHVNIIKEGQWTISPPLFDLKEVFLTLLDDFQKQLDLILKYNWDFDHHMKEDVPAAMEYIRTLCKPKDGKLLAIGHSMGGILLYAMLSQSGSEGRDSGLASVITLASSLDFTSSKSSLKLLLPLADPAQALNVPAIPLGALLAAAHPLMSLPPYVLSWLTSLVSAQKIPPESLEKLVLNNFGTVPSKLLLQLTTAFQEGGLRDRNGTFFYKHHLHKSNVPVLAIAGDRDVVCPPEAVYETVKHIPGNLVTYKVFGEPDGPHYGHYDLVGGPSAADQVHPCLSKFLIHHDMA* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0293 529 SUPERFAMILY alpha/beta-Hydrolases 71 526 IPR029058 -
Vvi17g0293 529 Gene3D alpha/beta hydrolase 274 524 IPR029058 -
Vvi17g0293 529 Gene3D alpha/beta hydrolase 59 149 IPR029058 -
Vvi17g0293 529 PIRSF UCP031088_abhydr 3 529 IPR016969 -
Vvi17g0293 529 PANTHER LYSOSOMAL ACID LIPASE-RELATED 67 523 - -
Vvi17g0293 529 Pfam alpha/beta hydrolase fold 92 501 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0293 Vvi-Chr17 3087528 3092399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0293 - - vvi:100247368 1008.44