Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0292 ATGCATATTTCCCAACAACTCCCTCCACCTCCCATGGCTTTCATCTCCTCCCCCATCTCCATTTCCCCCAAACTCCCCATTTTTCCAAAATACTCCCCCCTCTTTCCTTCTCCTCTCTCTTTTCCAACCAAATCCAGGAAGCTCAGGATCTTCTGTTGCTTAGCATTAGATCATCAACAAAATTGCTCAGCCAATGTCGAACCCTCAGCTGATCTTCGTGTGGTGTTCGCCAGTGGTGGTACCGGCGGCCACATTTACCCAGCCGTCGCCATCGCGGACGAGATCAAGATCATTAACCCTAACGCTCAAATCCTCTTCCTCGGCACCGCTCACGGTATGGAGAGCACGGCCGTTCCTTCCGCCGGCTACGATTTCGATTCCATTCCTGCCGTCCGACTGGCCCGGCCGATCTTCTCCCCCCAAAACATCCTCCTCCCTTACCGTTTGATCAAATCGATGGTCCAATGTTACCGCCGTTTGCGTGACTTCGACCCCGATATTGTGGTCGGCACCGGCGGCTACGTCTCGTTCCCGGTTTGTCTGGCGGCTGCGCTGAAAGGATTGAAATTGGTGATCCAGGAGCAGAACTCGGTGCCCGGGATCGCGAATTGGGTGCTTTCGTGGTTCGCTGATCAGGTTTTTGTTGCCTTCAATTCATCTATTGACTACTTCCCAAAGCACAAGTGTATTGTAAGTGGCAATCCGGTGAGGTTATCGGTGAGGCGGTATGTTTCGAAGGCGGCAGCAAGGTTGCATTTCTTTCCAAGTTATGTGAATTCAGGGAATTTGGAGGCGAAGGTAGTGTTGGTTCTTGGAGGTTCTTTAGGAGCCAATGCTATCAACATTGCAATGTTGAATTTGTACTATCAAATGCTGTTGGAGCACAAGAACTTGTTTATCATTTGGCAGACAGGTGTCGAGGCTTTTGATGAGATGGAAAGCCTTGTTAAGAACCATCCACATTTGGTTTTGTCCCCCTCTGAAACCCTGAAGGTTCTTGCACAATATGGATTTAGCGTATGCAGCTGCAGACCTTGTTGTTTCTAG 1047 0.4995 MHISQQLPPPPMAFISSPISISPKLPIFPKYSPLFPSPLSFPTKSRKLRIFCCLALDHQQNCSANVEPSADLRVVFASGGTGGHIYPAVAIADEIKIINPNAQILFLGTAHGMESTAVPSAGYDFDSIPAVRLARPIFSPQNILLPYRLIKSMVQCYRRLRDFDPDIVVGTGGYVSFPVCLAAALKGLKLVIQEQNSVPGIANWVLSWFADQVFVAFNSSIDYFPKHKCIVSGNPVRLSVRRYVSKAAARLHFFPSYVNSGNLEAKVVLVLGGSLGANAINIAMLNLYYQMLLEHKNLFIIWQTGVEAFDEMESLVKNHPHLVLSPSETLKVLAQYGFSVCSCRPCCF* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0292 348 Gene3D Glycogen Phosphorylase B; 259 336 - -
Vvi17g0292 348 PANTHER UDP-N-ACETYLGLUCOSAMINE--N-ACETYLMURAMYL-(PENTAPEPTIDE) PYROPHOSPHORYL-UNDECAPRENOL N-ACETYLGLUCOSAMINE TRANSFERASE 1 71 331 - -
Vvi17g0292 348 Gene3D Glycogen Phosphorylase B; 71 254 - -
Vvi17g0292 348 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 73 321 - -
Vvi17g0292 348 CDD GT28_MurG 73 320 - -
Vvi17g0292 348 Pfam Glycosyltransferase family 28 N-terminal domain 74 214 IPR004276 GO:0005975|GO:0016758|GO:0030259
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0292 18 326 Glycosyltransferase AT1G73740 51.429 3.07e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0292 K02563 - vvi:100242239 620.157