Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0290 ATGCAAGAGAATCAGATGGGAGGTCATACTATAAAATCTCATGGAGCCAAGGTGGCAAGGATACATATGCATGACTGGCTGATTCTGATACTTCTTATTGTTATAGATGTTATTTTAAATCTCATTGAGCCCTTTCATCGCTTTGTTGGGGAAGAGATGATGATAGATCTGAAATACCCAATGAAAGACAATACTGTACCTGTTTGGGCTGTTCCAATTATTGCAATATTGTTGCCTTTTGCAGCTATTCTTGCAAATTACTTTTACAGAAGGAATGTTTACGATCTACACCATGCAACATTAGGCCTCCTCTATTCTGTTCTAATAACTGGAGTTATAACGGATGCAATTAAAGATGCTGTTGGTCGACCACGACCGAACTTCTTCTGGCGGTGTTTCCCCAATGGAGCTGCATTGTTTGATCCTCTAACAAAGAATGTCATCTGTCATGGAGACAAGGGTGTTATAAAGGAAGGACACAAAAGTTTCCCTAGTGGGCATACTTCATGGTGCTTTGCAGGTCTGAGTTTCCTCTCTTGGTATTTATCAGGGAAAATTAGAGCATTTGATCGCAAGGGCCATATAGCAAAACTCGCTATTGTATTGCTTCCATTGCTTATGGCAGCTCTTGTTGGAGTTTCTCGTGTGGATGACTATTGGCATCATTGGCAGGATGTTTTTGTTGGAGGTCTCATAGGAATGACTGTAGCTTCATTTTGCTACCTGCAATGCTTTCCTTTCCCACATGTTAAGGATGGTTGGGCACCACATGCCTATTTTCAAGTTTTGGCAGAGGGGAACCATGTTCAGTCCTCATCCACAAGAATTCCCTCTCTTAGATTAAGGCAGCCAGAGATTGAGGCCGCATATATGCAACCTGGATTTAGCAGAGAAAGCACAGGAAACGATTGTCATTCTACAAGCCCGATTCTTGATGCAATGGAAAATGGGAGGAGATTTTGA 963 0.4174 MQENQMGGHTIKSHGAKVARIHMHDWLILILLIVIDVILNLIEPFHRFVGEEMMIDLKYPMKDNTVPVWAVPIIAILLPFAAILANYFYRRNVYDLHHATLGLLYSVLITGVITDAIKDAVGRPRPNFFWRCFPNGAALFDPLTKNVICHGDKGVIKEGHKSFPSGHTSWCFAGLSFLSWYLSGKIRAFDRKGHIAKLAIVLLPLLMAALVGVSRVDDYWHHWQDVFVGGLIGMTVASFCYLQCFPFPHVKDGWAPHAYFQVLAEGNHVQSSSTRIPSLRLRQPEIEAAYMQPGFSRESTGNDCHSTSPILDAMENGRRF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0290 320 PANTHER LIPID PHOSPHATE PHOSPHATASE 11 280 IPR043216 GO:0006644
Vvi17g0290 320 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 21 248 IPR036938 -
Vvi17g0290 320 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 19 252 - -
Vvi17g0290 320 SMART acid_phosph_2 101 241 IPR000326 -
Vvi17g0290 320 CDD PAP2_containing_1_like 55 243 - -
Vvi17g0290 320 Pfam PAP2 superfamily 101 243 IPR000326 -
Vvi17g0290 320 FunFam Lipid phosphate phosphatase 2 20 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0290 Vvi-Chr17 3063849 3066516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0290 1 288 Lipid Metabolism Gene Families AT1G15080 69.792 9.14e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0290 K18693 - vvi:100259341 654.055