Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0284 ATGTCCACCGACGGCTCCGCCGACCGCCGGGAAGATCCTCCTCCTCCTCAGAATAACGGCTCCGGTGCCATCGCCAGCATCGGAGGCGGGAATGGAGTAGTGTCCGGCGACTCCAGCCGGCCTTTTGTGCCCAGCCAAAGGCTCCGGCTGAACCCGAACAAGGATCACAAGCCGGACAACTACGATGACCTGCAATTGGACTTCAATCCCTCTATTTTCAGCTCTCTGGAGCGGTACTTACCCCCGAGCATGCTGTCGGTGTCGCGAGAAGCGAAGGTGCAGTTCATGAGGGAGATTTTGTTGCGGTACTTGCCCCAGGGAGAGCAGACCAGAGCTCAGAGGCACAGGGAGTACAGGCAGAAGATTATATCAAATTATCAGCCTTTACATAGAGAGTTATATGCCATGCACCCTGCAACCTTCTTTGCCCCCCAGTTTCTTAAAGCAATCAATGATAATACAGAGGAAAGCTTTAGAAGCATAATGTCCGAACCCTCTCCAGGTGTCTATACATTTGAAATGTTTCAGCCACATTTCTGTGAATTATTGTTACATGAGGTGGAAAATTTTGAAAACTGGGTCAATGAAGCGAAATTCAGAATCATGCGTCCGAATACGATGAATAAATTTGGTGCTGTTCTTGATGATTTTGGTCTTGAAACCATGCTTGACAAGCTCATGGAGGGGTTTATTCGTCCTATATCAAAAGTGTTCTTTTCTGAAGTTGGTGGCTCAACCTTGGATTCACATCATGGGTTTGTTGTCGAATACGGAAAAGACAGGGATGTTGACCTGGGTTTCCATGTGGATGACTCAGAAGTAACTTTGAATGTGTGCTTGGGTAAAGAATTTTCTGGTGGAGAATTGTTTTTCCGTGGAACTCGATGTGATAAACATGTAAATACAGGTAGTCAATCTGAGGAAATCTTTGACTATTCTCATGTCCCGGGGAAAGCGGTGCTTCACCGTGGTCGCCATAGGCATGGTGCCAGAGCTACAACAGCTGGTCACAGAATCAACCTACTCCTATGGTGTAGAAGTTCCATCTTTAGAGAGATGAAGAAGTATCAAAAAGATTTCTCTAGCTGGTGTGGAGAGTGCAATCGTGAAAAGAATGAAAGGCAACGCATGTCAATTGCCGCTACCAAATTGGAATTACTTAGGAGGGAGGGGGAATCCACAACATGA 1188 0.468 MSTDGSADRREDPPPPQNNGSGAIASIGGGNGVVSGDSSRPFVPSQRLRLNPNKDHKPDNYDDLQLDFNPSIFSSLERYLPPSMLSVSREAKVQFMREILLRYLPQGEQTRAQRHREYRQKIISNYQPLHRELYAMHPATFFAPQFLKAINDNTEESFRSIMSEPSPGVYTFEMFQPHFCELLLHEVENFENWVNEAKFRIMRPNTMNKFGAVLDDFGLETMLDKLMEGFIRPISKVFFSEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKEFSGGELFFRGTRCDKHVNTGSQSEEIFDYSHVPGKAVLHRGRHRHGARATTAGHRINLLLWCRSSIFREMKKYQKDFSSWCGECNREKNERQRMSIAATKLELLRREGESTT* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0284 395 MobiDBLite consensus disorder prediction 1 61 - -
Vvi17g0284 395 Gene3D q2cbj1_9rhob like domain 169 347 - -
Vvi17g0284 395 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 248 347 IPR005123 -
Vvi17g0284 395 SMART p4hc 167 346 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vvi17g0284 395 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 40 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0284 Vvi-Chr17 2947475 3002175 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0284 - - vvi:100262884 771.926