Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0274 ATGCCAACTGACATGGAACCTAATGGGCATAGGAAAATGAGGAGAAGTCATCTTACTGCTCAAGAAAGTAGCAGTTTGAACTTGTCAGAAGTTATTGATGAACTTGATCCTTGGACTGCATGGGCTTACAGACCTCACACCATTAAACTTTTATTTATAGGCACATGTTTTCTAATTTGGGCAAGTGGAGCCCTTGATCCAGATAACACTTCATCTGGTGATCTTGTGACCTCTGTGAAAAGGGGGATATTTGCGATGATTGCAGTTTTTCTTGCTTATAGCTTACTTCAAGCGCCTGCAACGGTTCTTATAAGGCCGCATCCTGCAATTTGGCGCTTGGTTCATGGACTGGCAGTTGTTTACCTTATTTCTCTTACATTTTTACTTTTCCAGAAGCGAGATGATGCTCGACAGTTCATGAGATTTCTGCATCCTAATCTTGGTGTTGAACTTCCTGAAAGATCATATGGATCAGATTGCCGCATTTATGTGCCAGAGAATCCCTCGAGCAGGTTTAAGAATGTTTATGAAACCTTGTTTGATGAATTTGTGCTTGCTCATATCTTTGGTTGGTGGGGAAAAGCCATAATGATCCGCAATCAACCTCTTTTATGGGTTTTGTCATTTGGGTTTGAGCTAATGGAGCTCACTTTCCGCCACATGTTGCCAAACTTCAATGAGTGCTGGTGGGATAGTATTGTTTTGGACGTTCTAGTATGCAATTGGTTTGGCATATGGGCAGGCATGCGTACTGTTCGATACTTTGATGGGAGAACATATGAGTGGGTCGGAATTAGTCGACAACCAAATATCATTAGTAAAGTAAAGCGAACATTGGGACAATTCACACCAGCACAATGGGATAAAGATGAGTGGCATCCTTTACTTGGTCCATGGCGATTTGTTCAAGTTCTTTTTCTTTGCATTGTGTTCTTGACAGTGGAGCTCAACACATTCTTTCTCAAGTTCTGCCTCTGGATTCCTGCTCAAAACCCCTTGATTGTGTATAGGTTAATTTTGTGGTGGCTAATTGCTATACCAACAATTCGTGAATATAACTCATTTCTACAAGACCGAACTCCAGCAAAAAAGTTGGGAGCATTTTGTTGGCTCTCCATTGCTGCATGCATAGTGGAACTCCTCATATGTATCAAATTTGGTAACGGTCTGTATCCAAATCCAATGCCTAGGTGGTTGGTAACATTCTGGATATCTGTTGGGGTTGCTTTGGTGGTTTTTCTGATTGTATGGTCATGGCAACTGCATAAAGCCTTGGAGCAAAAGAAGCTCTGA 1293 0.4161 MPTDMEPNGHRKMRRSHLTAQESSSLNLSEVIDELDPWTAWAYRPHTIKLLFIGTCFLIWASGALDPDNTSSGDLVTSVKRGIFAMIAVFLAYSLLQAPATVLIRPHPAIWRLVHGLAVVYLISLTFLLFQKRDDARQFMRFLHPNLGVELPERSYGSDCRIYVPENPSSRFKNVYETLFDEFVLAHIFGWWGKAIMIRNQPLLWVLSFGFELMELTFRHMLPNFNECWWDSIVLDVLVCNWFGIWAGMRTVRYFDGRTYEWVGISRQPNIISKVKRTLGQFTPAQWDKDEWHPLLGPWRFVQVLFLCIVFLTVELNTFFLKFCLWIPAQNPLIVYRLILWWLIAIPTIREYNSFLQDRTPAKKLGAFCWLSIAACIVELLICIKFGNGLYPNPMPRWLVTFWISVGVALVVFLIVWSWQLHKALEQKKL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0274 430 MobiDBLite consensus disorder prediction 1 21 - -
Vvi17g0274 430 MobiDBLite consensus disorder prediction 1 18 - -
Vvi17g0274 430 Pfam Phosphatidyl serine synthase 106 386 IPR004277 GO:0006659|GO:0106245
Vvi17g0274 430 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 34 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0274 Vvi-Chr17 2802009 2818610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0274 5 429 Acyl Lipid Metabolism Gene Families AT1G15110 77.752 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0274 K08730 - vvi:100266447 906.746