Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0273 ATGATCACCCTATCTTGTTTGATCATGGAGGCAAAGATGATGTATGAGACCATTTTCGCCAGAAGCTTTAGTCGGTATGAGCAGAAAAAATTGGGATATGGCGCGTTTGCTGTTTGCTTGATCACCACTTTCACCATTTTCACTGTGTTTAAGCCTTACTTGGGTCCTCTACCAGTGTTGAATTTACGGTTGTCAACGGGGGGTTTCAAGATGCTAATGGTGGAGGATACGACCAGTACCCAGCAAATAGTTGCAGAGATTAGAAGAAAGGAAATGGAGGCTTTAGTATGCAATATTGAACCCAGGTCAGATTTTTGTGTGATCAGTGGGGATGTTAGGGTTCATGGGAACTCATCCACCGTTTTTATTGCTTCATCAGCTCCAGTGGACATCTTGCCTGAGAATGGTTCATGGAGCATAAGACCTTATGCTCGGAAAGGAGACGCAAGAGCAATGAAGCACATTAAGAACTTCACAGTGAAAATGACAACGGGTCGTCAACATCTCCCACATTGCACTCAAAACCACACTGTTCCAGCCATCCTTTTCTCCCTCGGAGGATATTCTGGAAACCATTTTCATGCCTTTAGTGACGTCCTGATCCCACTGTATTTGACTTCCAGACAGTTCAATGGAGAAGTACAGTTTCTTGTGACTTCAAAATCGTTATGGTGGATCGCAAAATTCAGAATACTACTTCAAGAGTTGTCCCGATATCCCATCATTGACATTGATAGAGAAGAAGGAATCCATTGCTTCTCCAGCGCCATCATCGGCCTTAAGTGTCACAAAGAGCTGGACATCGACCCTTCAAAGTCTCCATACTCCATGAAAGACTTCAGGGAGTTCTTGAGAAGCTCATACTCACTGAAGAGAGCTACAGCAATCAAAGTAAGAGACGGTACTGACACCAAAAAACCACGGCTTCTGATCATTGCAAGAAAGAAGTCACGTTCATTTACAAATGATGGCAAAATCGCTGAAATGGCCAGAAGCTTGGGGTATGAAGTAATTGTTGCAGAGCCAAATGGGACAGAAATATCAAGATTCGCAGAACTGGTGAATTCTTGCGATGTACTGATGGGAGTTCATGGAGCTGGGCTTACAAACATCGTCTTCCTCCCTGAAAATGCAGTCCTGATCCAAGTAGTTCCCTTGGGTGGGCTGGAATGGGTGGCTAGATATGACTTTGGATTGCCGGCAGTGGACATGAAGATAAGGTATATAGAGTATCAGATAAAGGAAGAAGAGAGCAGCCTGATAGAGAAATACCCACATGAGCATGCAGTTCTAAGAGAACCCCATTCAATTACAAAGCTGGGATGGCTAGAGCTTAAGGCAGTATACCTGGACAAACAGAATGTAAAGCTTGATTTGAATAGGTTTAGGAACACCTTGTTGCAAGCCCTTCAGCTTCTGCATTAG 1425 0.4386 MITLSCLIMEAKMMYETIFARSFSRYEQKKLGYGAFAVCLITTFTIFTVFKPYLGPLPVLNLRLSTGGFKMLMVEDTTSTQQIVAEIRRKEMEALVCNIEPRSDFCVISGDVRVHGNSSTVFIASSAPVDILPENGSWSIRPYARKGDARAMKHIKNFTVKMTTGRQHLPHCTQNHTVPAILFSLGGYSGNHFHAFSDVLIPLYLTSRQFNGEVQFLVTSKSLWWIAKFRILLQELSRYPIIDIDREEGIHCFSSAIIGLKCHKELDIDPSKSPYSMKDFREFLRSSYSLKRATAIKVRDGTDTKKPRLLIIARKKSRSFTNDGKIAEMARSLGYEVIVAEPNGTEISRFAELVNSCDVLMGVHGAGLTNIVFLPENAVLIQVVPLGGLEWVARYDFGLPAVDMKIRYIEYQIKEEESSLIEKYPHEHAVLREPHSITKLGWLELKAVYLDKQNVKLDLNRFRNTLLQALQLLH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0273 474 PANTHER GLYCOSYLTRANSFERASE 30 473 IPR007657 GO:0016757
Vvi17g0273 474 Pfam Glycosyltransferase 61 288 381 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0273 Vvi-Chr17 2798874 2800520 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0273 - - vvi:100261238 947.577