Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0261 ATGATACTATTTTTTCCTGGCCGCCCTGACGGAACTCTTTCTTCCCTGTGCATTTTCAATATGTTGCTCTACTTGCTGGGGTCTTGCCTCATGGACATGGCAAAGAAGGGAAAAGTAAGTGAAGACAAAGTTGACTCGTTTAACCTACCAATGTATATCATGTCTTCCCAAGAACTGAAAGAGGCTATAGACAGGAATGGATGCTTCAGCTAG 213 0.4319 MILFFPGRPDGTLSSLCIFNMLLYLLGSCLMDMAKKGKVSEDKVDSFNLPMYIMSSQELKEAIDRNGCFS* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0261 70 Gene3D - 10 49 IPR042086 -
Vvi17g0261 70 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 69 IPR029063 -
Vvi17g0261 70 Gene3D Vaccinia Virus protein VP39 1 70 IPR029063 -
Vvi17g0261 70 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 70 IPR005299 GO:0008168
Vvi17g0261 70 Pfam SAM dependent carboxyl methyltransferase 1 70 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0261 Vvi-Chr17 2685432 2685735 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0261 - - zju:107418616 91.2781