Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0259 ATGGCACCAAAGAAAGAGATGGGAAACATAGGTGAAGCATACCCAATGAAGAGTGGCGATGGTCTTCATAGCTACTCCAACAACTCTTACTTCCAGAGAGATATTATAAACGCTGCCATGCAAATTGTCGGTGAGGCAATTGTGAAAATCGTAGACATCCTCAAAATTTCTCCTTCAACCACCATTAGGGTGGCTGATCTGGGTTGTTCAGTTGGGCCTAACACCTTCTTCGCAATGGAAAACATACTAGAAGCTATTGAGCTCAAGTGCCAAAACCAAGGGCTCGATTCTCAAATCCCTGAATTCCAAGTCTTCTTCAATGATCAGACCTCCAATGACTTCAACAGTCTCTTCTCATCCCTCCCTCCCAATGGGCGATATCATTCGGCTGGGGTTCCGGGTTCTTTCTACTCTCGCCTGTTTCCCAATCACTCTCTTCATATTGTTCATTCATCCTTCTCCATTCAGTGGCTTTCAAGAGTGCCGAAGAAGGTGGTGGACAGAAGTTCTCCCGCCTGGAACAAAGGAAGGATCTATTACGCAAGTGCTGCGGATGAAGTTGTTGAGGCCTATTCAGCTCAGTGTGCAGAGGACATGGCACGGTTTTTGCAGGCGAGGGCACAAGAGATTGCAGATGGTGGGTTGATGATTCTAATCTTTCCAGCCCGCCTCGATGGAATTCCGCATTCTCAATTCAGTAACAATATAATGTTCGACATGTTGGGATGTTGCCTCATGGACATGGCCCAAAAGGGAATAGTAAGCGAAGAGAAAGTGGACATGTTTAACTTGCCACTGTATTTCATTTCCGCCCAAGAGCTGGAAGCGATTATAGAGAGAAACGGATGTTTCAGCATTGAGAAAATGGAGATCCTACATCCCACCATAACTGCACAATCGCTTATAAGCACTCCTCATAAAGGCCAAGCGATCTCGTTCCACATACGAGCTGCCACGGAGGGACTCATCAAGGCACATTTTGGAGAGGAGATCCTGGATCAACTCTTTGACTCATATTCTAGAAAGGTCGAAGACGAGTATTCTCTGATTGTGTCTGCGATAACACTAAACTATTGTGCTGTGCTTAAACGCAAAACTATGAATTAG 1107 0.4544 MAPKKEMGNIGEAYPMKSGDGLHSYSNNSYFQRDIINAAMQIVGEAIVKIVDILKISPSTTIRVADLGCSVGPNTFFAMENILEAIELKCQNQGLDSQIPEFQVFFNDQTSNDFNSLFSSLPPNGRYHSAGVPGSFYSRLFPNHSLHIVHSSFSIQWLSRVPKKVVDRSSPAWNKGRIYYASAADEVVEAYSAQCAEDMARFLQARAQEIADGGLMILIFPARLDGIPHSQFSNNIMFDMLGCCLMDMAQKGIVSEEKVDMFNLPLYFISAQELEAIIERNGCFSIEKMEILHPTITAQSLISTPHKGQAISFHIRAATEGLIKAHFGEEILDQLFDSYSRKVEDEYSLIVSAITLNYCAVLKRKTMN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0259 368 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 15 346 IPR005299 GO:0008168
Vvi17g0259 368 Gene3D Vaccinia Virus protein VP39 28 295 IPR029063 -
Vvi17g0259 368 Pfam SAM dependent carboxyl methyltransferase 57 364 IPR005299 GO:0008168
Vvi17g0259 368 Gene3D - 15 347 IPR042086 -
Vvi17g0259 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 365 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0259 Vvi-Chr17 2677498 2679041 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0259 - - vvi:100259333 735.717