Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0256 ATGGCGAACGACGGCGACATTCTGATGCTGGAAGCACCGCCACAGGCCTCACGTCCGGCGGAATTCATCGACGCCTTGCCGTACATTGACGATGATTATGGCCACCCCAAGGTCAAAGAAGAGGTGGATCGATTGGTCGAAGATGAGATGCGCCGGAGCTCCAAAAAGCCCTCCGATTTCCTCAAAGACCTCCCTCCGCTTCCCCCCTTCGGTTTCCACAATCACCCCATGCTTGCTAGAGAATATGAGCGTGTGAGAGCGGGGAAGCCTCCAGTGGCACTTGACATGTCACGATATGGACTTGAAATGCCTCCTATGAATAAACGGAATGATGAAACTGCTTGGAAACACGCACTTCAGAAAGCTCAGCGCCTACTGCAACATCAAGTAATTAGGCTGGAAAATCTGGAACTGATGTCAAAACATGGTGCTGATGTCTGGAAACAGCACAACCAACGACTTGAGGCATACTTGTCCAGAATGCAAGCATTGGCAATGGAACAAAATGAAAAGATTGAAACTGTGAATCGTGAAAGGAAATATCATCAGCAAAATACTGCCTTTGAGCTTAACGCTTTGTCTGCACAATGGAAGGAGCTCTGTGAAAAAAATATTGAAATTCGAACAGCTTGTGCTAAAATTGAAAATAATATTGAAGAACTTAGGAGAGAAGCTGCAGAGAGAGGCTGGAATTTGGATGCTAATATAGATAATGGTTCTTTATCACACTCAGAACAGCACCAGCAGATCCAGAAAACATTAACCAAGTAG 771 0.4578 MANDGDILMLEAPPQASRPAEFIDALPYIDDDYGHPKVKEEVDRLVEDEMRRSSKKPSDFLKDLPPLPPFGFHNHPMLAREYERVRAGKPPVALDMSRYGLEMPPMNKRNDETAWKHALQKAQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEAYLSRMQALAMEQNEKIETVNRERKYHQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDANIDNGSLSHSEQHQQIQKTLTK* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0256 256 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 22 227 IPR008409 GO:0006397
Vvi17g0256 256 Coils Coil 119 139 - -
Vvi17g0256 256 Coils Coil 158 178 - -
Vvi17g0256 256 MobiDBLite consensus disorder prediction 237 256 - -
Vvi17g0256 256 Coils Coil 204 224 - -
Vvi17g0256 256 PANTHER BCAS2 PROTEIN 20 242 IPR008409 GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0256 K12861 - vvi:100254130 487.648